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field_common.hh
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1 /*!
2  *
3  * Copyright (C) 2015 Technical University of Liberec. All rights reserved.
4  *
5  * This program is free software; you can redistribute it and/or modify it under
6  * the terms of the GNU General Public License version 3 as published by the
7  * Free Software Foundation. (http://www.gnu.org/licenses/gpl-3.0.en.html)
8  *
9  * This program is distributed in the hope that it will be useful, but WITHOUT
10  * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
11  * FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
12  *
13  *
14  * @file field_common.hh
15  * @brief
16  */
17 
18 #ifndef FIELD_COMMON_HH_
19 #define FIELD_COMMON_HH_
20 
21 #include <vector>
22 using namespace std;
23 
24 #include "system/exceptions.hh"
25 #include "fields/field_values.hh"
26 #include "input/accessors.hh"
27 #include "input/type_generic.hh"
28 #include "tools/time_marks.hh"
29 #include "tools/time_governor.hh"
30 
32 #include "fields/field_flag.hh"
33 #include "fields/unit_si.hh"
34 #include "io/output_time.hh"
35 
36 
37 class Mesh;
38 class Region;
39 class Observe;
40 
41 namespace IT=Input::Type;
42 
43 /**
44  * Left and right time limit, used in the @p set_time() method.
45  * Assigned values allow to index an array.
46  */
47 enum class LimitSide {
48  left=0,
49  right=1
50 };
51 
52 
53 
54 /**
55  * @brief Common abstract parent of all Field<...> classes.
56  *
57  * We need common ancestor in order to keep a list of all fields in one EqData object and allow
58  * collective operations like @p set_time or @p init_from_input.
59  */
60 class FieldCommon {
61 
62 public:
63  TYPEDEF_ERR_INFO(EI_Time, double);
64  TYPEDEF_ERR_INFO(EI_Field, std::string);
65  DECLARE_INPUT_EXCEPTION(ExcNonascendingTime,
66  << "Non-ascending time: " << EI_Time::val << " for field " << EI_Field::qval << ".\n");
67  DECLARE_INPUT_EXCEPTION(ExcMissingDomain,
68  << "Missing domain specification (region or r_id) in the field descriptor:");
69  DECLARE_EXCEPTION(ExcFieldMeshDifference,
70  << "Two copies of the field " << EI_Field::qval << "call set_mesh with different arguments.\n");
71 
72 
73 
74  /**
75  * Set name of the field. In fact there are two attributes set by this method.
76  *
77  * The first is name used to identify the field as part of a FieldSet or MultiField objects.
78  * This name is permanent and can be set only by this method. Can be accessed by @p name() method.
79  * This name is also used at output.
80  *
81  * The second is @p input_name_ that determines appropriate key name in the input field descriptor.
82  * This name is also set by this method, but is stored in the internal shared space which
83  * is overwritten during call of copy_from method or assignment operator. Can be accessed by @p input_name() mathod.
84  *
85  */
86  FieldCommon &name(const string & name)
87  { name_=shared_->input_name_ = name;
88  return *this;
89  }
90  /**
91  * Set description of the field, used for description of corresponding key in documentation.
92  */
93  FieldCommon & description(const string & description)
94  { shared_->input_description_ = description; return *this;}
95  /**
96  * Set default value for the field's key from which the default constant valued field will be constructed.
97  *
98  * During the first call of the @p set_time method, we check that the field is defined on all regions.
99  * On regions where it is not set yet, we use given @p dflt string to get particular instance of
100  * FieldBase<> (see @p check_initialized_region_fields_).
101  * The default string is interpreted in the same way as if it appears in the input file
102  * as the value of the field. In particular it can be whole record with @p TYPE of the field etc.
103  * Most common choice is however mere constant.
104  */
105  FieldCommon & input_default(const string &input_default)
106  { shared_->input_default_ = input_default; return *this;}
107  /**
108  * @brief Set basic units of the field.
109  *
110  * Currently, we use it only during output and we represents units just by a string.
111  *
112  * TODO:
113  * Particular class for representing and conversion of various units would be more appropriate.
114  * This can allow specification of the units on the inptu, automatic conversion and the same on the output.
115  * Possibly this allow using Boost::Units library, however, it seems to introduce lot of boilerplate code.
116  * But can increase correctness of the calculations.
117  */
118  FieldCommon & units(const UnitSI & units)
119  { shared_->units_ = units; return *this;}
120 
121  /**
122  * For the fields returning "Enum", we have to pass the Input::Type::Selection object to
123  * the field implementations.
124  *
125  * We must save raw pointer since selection may not be yet initialized (during static initialization phase).
126  */
128  {
129  shared_->input_element_selection_=element_selection;
130  return *this;
131  }
132 
133  /**
134  * Output discrete space used in the output() method. Can be different for different field copies.
135  * one can choose between:
136  * data constant on elements, linear data given in nodes, and discontinuous linear data.
137  *
138  * If not set explicitly by this method, the default value is OutputTime::ELEM_DATA
139  */
141  { type_of_output_data_ = rt; return *this; }
142 
143  /**
144  * Set given mask to the field flags, ignoring default setting.
145  * Default setting is declare_input & equation_input & allow_output.
146  */
147  FieldCommon & flags(FieldFlag::Flags::Mask mask)
148  { flags_ = FieldFlag::Flags(mask); return *this; }
149 
150  /**
151  * Add given mask to the field flags.
152  */
153  FieldCommon & flags_add(FieldFlag::Flags::Mask mask)
154  { flags().add(mask); return *this; }
155 
156  /**
157  * Set vector of component names.
158  * Set number of components for run-time sized vectors. This is used latter when we construct
159  * objects derived from FieldBase<...>.
160  *
161  * n_comp_ is constant zero for fixed values, this zero is set by Field<...> constructors
162  */
163  void set_components(const std::vector<string> &names) {
164  // Test of unique values in names vector for MultiField
165  if (multifield_) {
166  std::vector<string> cpy = names;
167  std::sort( cpy.begin(), cpy.end() );
168  cpy.erase( std::unique( cpy.begin(), cpy.end() ), cpy.end() );
169  if (names.size() != cpy.size()) {
170  THROW( Input::ExcInputMessage() << EI_Message("The field " + this->input_name()
171  + " has set non-unique names of components.") );
172  }
173  }
174 
175  shared_->comp_names_ = names;
176  shared_->n_comp_ = (shared_->n_comp_ ? names.size() : 0);
177  }
178 
179 
180  /**
181  * Set internal mesh pointer.
182  */
183  virtual void set_mesh(const Mesh &mesh) {};
184  /**
185  * Set the data list from which field will read its input. It is list of "field descriptors".
186  * When reading from the input list we consider only field descriptors containing key of
187  * named by the field name. These field descriptors has to have times forming ascending sequence.
188  *
189  * The list is used by set_time method to set field on individual regions to actual FieldBase descendants.
190  */
191  virtual void set_input_list(const Input::Array &list) =0;
192 
193  /**
194  * Getters.
195  */
196  const std::string &input_name() const
197  { return shared_->input_name_;}
198 
199  const std::string &name() const
200  { return name_;}
201 
202  const std::string description() const
203  {return shared_->input_description_;}
204 
205  const std::string &input_default() const
206  { return shared_->input_default_;}
207 
208  const UnitSI &units() const
209  {
210  ASSERT(shared_->units_.is_def())(name()).error("Getting undefined unit.\n");
211  return shared_->units_;
212  }
213 
215  { return type_of_output_data_; }
216 
217  bool is_bc() const
218  { return shared_->bc_;}
219 
220  unsigned int n_comp() const
221  { return shared_->n_comp_;}
222 
223  const Mesh * mesh() const
224  { return shared_->mesh_;}
225 
227  { return flags_; }
228 
229  /**
230  * Returns time set by last call of set_time method.
231  * Can be different for different field copies.
232  */
233  double time() const
234  { return last_time_; }
235 
236  /**
237  * Returns true if the field change algorithm for the current time set through the @p set_time method.
238  * This happen for all times in the field descriptors on the input of this particular field.
239  */
240  bool is_jump_time() {
241  return is_jump_time_;
242  }
243 
244  /**
245  * If the field on given region @p reg exists and is of type FieldConstant<...> the method method returns true
246  * otherwise it returns false.
247  * Then one can call ElementAccessor<spacedim>(mesh(), reg ) to construct an ElementAccessor @p elm
248  * pointing to "virtual" element on which Field::value returns constant value.
249  * Unlike the Field<>::field_result method, this one provides no value, so it have common header (arguments, return type) and
250  * could be part of FieldCommon and FieldSet which is useful in some applications.
251  *
252  * TODO:Current implementation use virtual functions and can be prohibitively slow if called for every element. If this
253  * becomes necessary it is possible to incorporate such test into set_time method and in this method just return precomputed result.
254  */
255  virtual bool is_constant(Region reg) =0;
256 
257 
258  /**
259  * @brief Indicates special field states.
260  *
261  * Extension of the previous method. Return possible values from the enum @p FieldResult, see description there.
262  * The initial state is @p field_none, if the field is correctly set on all regions of the @p region_set given as parameter
263  * we return state @p field_other or even more particular result.
264  *
265  * Special field values spatially constant. Could allow optimization of tensor multiplication and
266  * tensor or vector addition. field_result_ should be set in constructor and in set_time method of particular Field implementation.
267  * We return value @p result_none, if the field is not initialized on the region of the given element accessor @p elm.
268  * Other possible results are: result_zeros, result_eye, result_ones, result_constant, result_other
269  * see @p FieldResult for explanation.
270  *
271  * Multifield return most particular value that holds for all its subfields.
272  *
273  *
274  */
275  virtual FieldResult field_result( RegionSet region_set) const =0;
276 
277 
278  /**
279  * Returns true if set_time_result_ is not @p TimeStatus::constant.
280  * Returns the same value as last set_time method.
281  */
282  bool changed() const
283  {
284  ASSERT( set_time_result_ != TimeStatus::unknown ).error("Invalid time status.");
285  return ( (set_time_result_ == TimeStatus::changed) );
286  }
287 
288  /**
289  * Common part of the field descriptor. To get finished record
290  * one has to add keys for individual fields. This is done automatically
291  * using FieldSet::get_input_type().
292  */
293  static IT::Record field_descriptor_record(const string& record_name);
294 
295  /**
296  * Create description of field descriptor record.
297  */
298  static const std::string field_descriptor_record_description(const string& record_name);
299 
300  /**
301  * Returns input type for particular field instance, this is reference to a static member input_type of the corresponding @p FieldBase
302  * class (i.e. with the same template parameters). This is used in FieldSet::make_field_descriptor_type.
303  */
304  virtual IT::Instance get_input_type() =0;
305 
306  /**
307  * Returns input type for MultiField instance.
308  * TODO: temporary solution, see @p multifield_
309  */
310  virtual IT::Array get_multifield_input_type() =0;
311 
312  /**
313  * Pass through the input array @p input_list_, collect all times where the field could change and
314  * put appropriate time marks into global TimeMarks object.
315  * Introduced time marks have both given @p mark_type and @p type_input() type.
316  *
317  * Further development:
318  * - we have to distinguish "jump" times and "smooth" times
319  */
320  void mark_input_times(const TimeGovernor &tg);
321 
322  /**
323  * Abstract method to update field to the new time level.
324  * Implemented by in class template Field<...>.
325  *
326  * Return true if the value of the field was changed on some region.
327  * The returned value is also stored in @p changed_during_set_time data member.
328  *
329  * Default values helps when creating steady field. Note that default TimeGovernor constructor
330  * set time to 0.0.
331  *
332  * Different field copies can be set to different times.
333  *
334  * TODO: update following:
335  * Set side of limit when calling @p set_time
336  * with jump time, i.e. time where the field change implementation on some region.
337  * Wee assume that implementations prescribe only smooth fields.
338  * This method invalidate result of
339  * @p changed() so it should be called just before @p set_time.
340  * Can be different for different field copies.
341  */
342  virtual bool set_time(const TimeStep &time, LimitSide limit_side) =0;
343 
344  /**
345  * Check that @p other is instance of the same Field<..> class and
346  * perform assignment. Polymorphic copy.
347  *
348  * The copy is performed only if *this have set flag 'input_copy'.
349  * If *this have set also the flag 'decare_input' the copy is performed only if the
350  * input_list is empty.
351  */
352  virtual void copy_from(const FieldCommon & other) =0;
353 
354  /**
355  * Output the field.
356  * The parameter @p output_fields is checked for value named by the field name. If the key exists,
357  * then the output of the field is performed. If the key do not appear in the input, no output is done.
358  */
359  virtual void output(std::shared_ptr<OutputTime> stream) =0;
360 
361  /**
362  * Perform the observe output of the field.
363  * The Observe object passed by the parameter is called with the particular Field<> as the parameter
364  * to evaluate the field in observation points and store the values in the OutputData arrays.
365  */
366  virtual void observe_output(std::shared_ptr<Observe> observe) =0;
367 
368 
369  /**
370  * Sets @p component_index_
371  */
372  void set_component_index(unsigned int idx)
373  {
374  this->component_index_ = idx;
375  }
376 
377  /**
378  * Return @p multifield_ flag.
379  * TODO: temporary solution
380  */
381  inline bool is_multifield() const
382  {
383  return this->multifield_;
384  }
385 
386  /**
387  * Virtual destructor.
388  */
389  virtual ~FieldCommon();
390 
391 
392 protected:
393  /**
394  * Private default constructor. Should be used only through
395  * Field<...>
396  */
397  FieldCommon();
398 
399  /**
400  * Private copy constructor. Should be used only through
401  * Field<...>
402  */
403  FieldCommon(const FieldCommon & other);
404 
405  /**
406  * Invalidate last time in order to force set_time method
407  * update region_fields_.
408  */
410  {
411  last_time_ = -numeric_limits<double>::infinity();
412  }
413 
414  /**
415  * Setters for essential field properties.
416  */
417  /**
418  * Data shared among copies of the same field.
419  *
420  * This allow field copies in different equations with different time setting, but
421  * sharing common input field descriptor array and common history.
422  */
423  struct SharedData {
424  /**
425  * Empty constructor.
426  */
427  SharedData() : list_idx_(0) {};
428 
429  /**
430  * True for boundary fields.
431  */
432  bool bc_;
433  /**
434  * Number of components for fields that return variable size vectors. Zero in other cases.
435  */
436  unsigned int n_comp_;
437  /**
438  * Names of field components.
439  */
441  /**
442  * Name of the particular field. Used to name the key in the Field list Record.
443  */
444  std::string input_name_;
445  /**
446  * Description of corresponding key in the Field list Record.
447  */
448  std::string input_description_;
449  /**
450  * Units of the field values. Currently just a string description.
451  */
453  /**
454  * For Enum valued fields this is the input type selection that should be used
455  * to read possible values of the field (e.g. for FieldConstant the key 'value' has this selection input type).
456  *
457  * Is empty selection for for non-enum values fields.
458  */
460  /**
461  * Possible default value of the field.
462  */
464  /**
465  * Pointer to the mesh on which the field lives.
466  */
467  const Mesh *mesh_;
468 
469  /**
470  * Vector of input field descriptors from which the field is set.
471  */
473 
474  /**
475  * Index to current position of input field descriptor.
476  */
477  unsigned int list_idx_;
478 
479  /**
480  * True after check_initialized_region_fields_ is called. That happen at first call of the set_time method.
481  */
483 
484  /**
485  * For which values of an enum valued field we do not
486  * check the field. User is responsible, that the value will not be called
487  * on such regions.
488  */
490 
491 
492  };
493 
494  /**
495  * Name that identifies the field in the field_set. By default this is same as
496  * shared_->input_name_.
497  */
498  std::string name_;
499 
500  /**
501  * Data shared among copies of the same input field.
502  */
503  std::shared_ptr<SharedData> shared_;
504 
505  /**
506  * Result of last set time method
507  */
508  enum class TimeStatus {
509  changed, //< Field changed during last set time call.
510  constant, //< Field doesn't change.
511  unknown //< Before first call of set_time.
512  };
513 
514  // TODO: Merge time information: set_time_result_, last_time_, last_limit_side_, is_jump_time into
515  // a single structure with single getter.
516  /**
517  * Status of @p history.
518  */
520 
521  /**
522  * Last set time. Can be different for different field copies.
523  * Store also time limit, since the field may be discontinuous.
524  */
525  double last_time_ = -numeric_limits<double>::infinity();
526  LimitSide last_limit_side_ = LimitSide::left;
527 
528  /**
529  * Set to true by the @p set_time method the field algorithm change on any region.
530  * Accessible through the @p is_jump_time method.
531  */
533 
534  /**
535  * Output data type used in the output() method. Can be different for different field copies.
536  */
538 
539  /**
540  * Specify if the field is part of a MultiField and which component it is
541  */
542  unsigned int component_index_;
543 
544  /**
545  * Flag determining if object is Multifield or Field.
546  * TODO: temporary solution, goal is to make these two classes to behave similarly
547  */
549 
550  /**
551  * Maximum number of FieldBase objects we store per one region.
552  */
553  static const unsigned int history_length_limit_=3;
554 
555  /// Field flags. Default setting is "an equation input field, that can read from user input, and can be written to output"
557 
558  /**
559  * Stream output operator
560  */
561  friend std::ostream &operator<<(std::ostream &stream, const FieldCommon &field) {
562 
563  vector<string> limit_side_str = {"left", "right"};
564 
565  stream
566  << "field name:" << field.name()
567  << " n. comp.:" << field.n_comp()
568  << " last time:" << field.last_time_
569  << " last limit side:" << limit_side_str[(unsigned int) field.last_limit_side_];
570  return stream;
571  }
572 };
573 
574 
575 
576 
577 
578 
579 
580 #endif /* FIELD_COMMON_HH_ */
virtual void set_mesh(const Mesh &mesh)
std::string input_description_
Common abstract parent of all Field<...> classes.
Definition: field_common.hh:60
bool is_jump_time_
Accessor to input data conforming to declared Array.
Definition: accessors.hh:552
FieldCommon & input_selection(Input::Type::Selection element_selection)
static constexpr Mask allow_output
The field can output. Is part of generated output selection. (default on)
Definition: field_flag.hh:37
FieldCommon & flags_add(FieldFlag::Flags::Mask mask)
std::string name_
unsigned int component_index_
vector< Input::Record > input_list_
Definition: mesh.h:95
Helper class that stores data of generic types.
Definition: type_generic.hh:88
double last_time_
const std::string & input_default() const
#define ASSERT(expr)
Allow use shorter versions of macro names if these names is not used with external library...
Definition: asserts.hh:347
Basic time management functionality for unsteady (and steady) solvers (class Equation).
FieldCommon & units(const UnitSI &units)
Set basic units of the field.
const std::string description() const
#define DECLARE_EXCEPTION(ExcName, Format)
Macro for simple definition of exceptions.
Definition: exceptions.hh:150
Basic time management class.
Class for declaration of inputs sequences.
Definition: type_base.hh:321
std::shared_ptr< SharedData > shared_
OutputTime::DiscreteSpace output_type() const
double time() const
friend std::ostream & operator<<(std::ostream &stream, const FieldCommon &field)
const std::string & name() const
FieldFlag::Flags & flags()
FieldCommon & input_default(const string &input_default)
const UnitSI & units() const
bool is_multifield() const
LimitSide last_limit_side_
std::vector< FieldEnum > no_check_values_
FieldResult
bool is_jump_time()
FieldCommon & description(const string &description)
Definition: field_common.hh:93
void set_component_index(unsigned int idx)
IT::Selection input_element_selection_
const Mesh * mesh() const
FieldCommon & name(const string &name)
Definition: field_common.hh:86
unsigned int n_comp() const
#define TYPEDEF_ERR_INFO(EI_Type, Type)
Macro to simplify declaration of error_info types.
Definition: exceptions.hh:186
DECLARE_INPUT_EXCEPTION(ExcFV_Input,<< "Wrong field value input: "<< EI_InputMsg::val)
bool changed() const
void set_components(const std::vector< string > &names)
Record type proxy class.
Definition: type_record.hh:171
void set_history_changed()
FlagArray< FieldFlag > Flags
Definition: field_flag.hh:26
FieldCommon & flags(FieldFlag::Flags::Mask mask)
const std::string & input_name() const
static constexpr Mask equation_input
The field is data parameter of the owning equation. (default on)
Definition: field_flag.hh:33
Class for representation SI units of Fields.
Definition: unit_si.hh:40
bool is_bc() const
#define THROW(whole_exception_expr)
Wrapper for throw. Saves the throwing point.
Definition: exceptions.hh:45
Representation of one time step..
TimeStatus set_time_result_
Template for classes storing finite set of named values.
LimitSide
Definition: field_common.hh:47
FieldCommon & output_type(OutputTime::DiscreteSpace rt)
static constexpr Mask declare_input
The field can be set from input. The key in input field descriptor is declared. (default on) ...
Definition: field_flag.hh:35
std::vector< std::string > comp_names_