#include <transport_operator_splitting.hh>

Inheritance diagram for ConcentrationTransportBase:

Collaboration diagram for ConcentrationTransportBase:

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Public Member Functions
	ConcentrationTransportBase (Mesh &init_mesh, const Input::Record in_rec)

virtual void	set_target_time (double target_time)=0

virtual void	set_balance_object (std::shared_ptr< Balance > balance)=0

virtual bool	evaluate_time_constraint (double &time_constraint)=0
	Computes a constraint for time step. More...

virtual const vector< unsigned int > &	get_subst_idx ()=0
	Return substance indices used in balance. More...

virtual void	calculate_concentration_matrix ()=0
	Calculate the array of concentrations per element (for reactions). More...

virtual void	update_after_reactions (bool solution_changed)=0
	Perform changes to transport solution after reaction step. More...

virtual void	set_output_stream (std::shared_ptr< OutputTime > stream)=0
	Setter for output stream. More...

virtual std::shared_ptr< OutputTime >	output_stream ()=0
	Getter for output stream. More...

virtual double **	get_concentration_matrix ()=0
	Getter for array of concentrations per element. More...

virtual const Vec &	get_solution (unsigned int sbi)=0
	Return PETSc vector with solution for sbi-th substance. More...

virtual void	get_par_info (LongIdx &el_4_loc, Distribution &el_ds)=0
	Return array of indices of local elements and parallel distribution of elements. More...

virtual LongIdx *	get_row_4_el ()=0
	Return global array of order of elements within parallel vector. More...

virtual void	set_velocity_field (const MH_DofHandler &dh)=0
	Pass velocity from flow to transport. More...

virtual unsigned int	n_substances ()=0
	Returns number of trnasported substances. More...

virtual SubstanceList &	substances ()=0
	Returns reference to the vector of substnace names. More...

Public Member Functions inherited from EquationBase
	EquationBase ()

	EquationBase (Mesh &mesh, const Input::Record in_rec)

virtual void	initialize ()

virtual void	zero_time_step ()

virtual	~EquationBase ()

virtual void	update_solution ()

virtual void	choose_next_time ()

virtual void	set_time_upper_constraint (double dt, std::string message)

virtual void	set_time_lower_constraint (double dt, std::string message)

TimeGovernor &	time ()

virtual void	set_time_governor (TimeGovernor &time)

double	planned_time ()

double	solved_time ()

Mesh &	mesh ()

TimeMark::Type	mark_type ()

FieldSet &	data ()

virtual void	get_solution_vector (double *&vector, unsigned int &size)

virtual void	get_parallel_solution_vector (Vec &vector)

virtual void	output_data ()
	Write computed fields. More...

Static Public Member Functions
static Input::Type::Abstract &	get_input_type ()
	Common specification of the input record for secondary equations. More...

Additional Inherited Members
Protected Attributes inherited from EquationBase
bool	equation_empty_
	flag is true if only default constructor was called More...

Mesh *	mesh_

TimeGovernor *	time_

Input::Record	input_record_

FieldSet *	eq_data_

std::shared_ptr< Balance >	balance_
	object for calculation and writing the mass balance to file. More...

Detailed Description

Abstract interface class for implementations of transport equation within TransportOperatorSplitting.

Definition at line 61 of file transport_operator_splitting.hh.

Constructor & Destructor Documentation

ConcentrationTransportBase::ConcentrationTransportBase	(	Mesh &	init_mesh,
		const Input::Record	in_rec
	)

inline

Constructor.

Definition at line 67 of file transport_operator_splitting.hh.

Member Function Documentation

virtual void ConcentrationTransportBase::calculate_concentration_matrix ( )

pure virtual

Calculate the array of concentrations per element (for reactions).

Implemented in ConvectionTransport.

virtual bool ConcentrationTransportBase::evaluate_time_constraint ( double & time_constraint )

pure virtual

Computes a constraint for time step.

Implemented in ConvectionTransport.

virtual double** ConcentrationTransportBase::get_concentration_matrix ( )

pure virtual

Getter for array of concentrations per element.

Implemented in ConvectionTransport.

Abstract & ConcentrationTransportBase::get_input_type ( )

static

Common specification of the input record for secondary equations.

Definition at line 61 of file transport_operator_splitting.cc.

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virtual void ConcentrationTransportBase::get_par_info	(	LongIdx *&	el_4_loc,
		Distribution *&	el_ds
	)

pure virtual

Return array of indices of local elements and parallel distribution of elements.

Implemented in ConvectionTransport.

virtual LongIdx* ConcentrationTransportBase::get_row_4_el ( )

pure virtual

Return global array of order of elements within parallel vector.

Implemented in ConvectionTransport.

virtual const Vec& ConcentrationTransportBase::get_solution ( unsigned int sbi )

pure virtual

Return PETSc vector with solution for sbi-th substance.

Implemented in ConvectionTransport.

virtual const vector<unsigned int>& ConcentrationTransportBase::get_subst_idx ( )

pure virtual

Return substance indices used in balance.

Implemented in ConcentrationTransportModel, and ConvectionTransport.

virtual unsigned int ConcentrationTransportBase::n_substances ( )

pure virtual

Returns number of trnasported substances.

Implemented in ConvectionTransport, and ConcentrationTransportModel.

virtual std::shared_ptr<OutputTime> ConcentrationTransportBase::output_stream ( )

pure virtual

Getter for output stream.

Implemented in ConcentrationTransportModel, and ConvectionTransport.

virtual void ConcentrationTransportBase::set_balance_object ( std::shared_ptr< Balance > balance )

pure virtual

Use Balance object from upstream equation (e.g. in various couplings) instead of own instance.

Implemented in ConcentrationTransportModel, and ConvectionTransport.

virtual void ConcentrationTransportBase::set_output_stream ( std::shared_ptr< OutputTime > stream )

pure virtual

Setter for output stream.

Implemented in ConcentrationTransportModel, and ConvectionTransport.

virtual void ConcentrationTransportBase::set_target_time ( double target_time )

pure virtual

Set time interval which is considered as one time step by TransportOperatorSplitting. In particular the velocity field dosn't change over this interval.

Dependencies:

velocity, porosity -> matrix, source_vector matrix -> time_step

data_read_times -> time_step (not necessary if we won't stick to jump times) data -> source_vector time_step -> scaling

Implemented in ConcentrationTransportModel, and ConvectionTransport.

virtual void ConcentrationTransportBase::set_velocity_field ( const MH_DofHandler & dh )

pure virtual

Pass velocity from flow to transport.

Implemented in ConvectionTransport, and ConcentrationTransportModel.

virtual SubstanceList& ConcentrationTransportBase::substances ( )

pure virtual

Returns reference to the vector of substnace names.

Implemented in ConvectionTransport, and ConcentrationTransportModel.