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field_algo_base.hh
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1 /*!
2  *
3  * Copyright (C) 2015 Technical University of Liberec. All rights reserved.
4  *
5  * This program is free software; you can redistribute it and/or modify it under
6  * the terms of the GNU General Public License version 3 as published by the
7  * Free Software Foundation. (http://www.gnu.org/licenses/gpl-3.0.en.html)
8  *
9  * This program is distributed in the hope that it will be useful, but WITHOUT
10  * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
11  * FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
12  *
13  *
14  * @file field_algo_base.hh
15  * @brief
16  * @todo
17  * - better tests:
18  * - common set of quantities with different kind of values (scalar, vector, tensor, discrete, ..),
19  * common points and elements for evaluation
20  * - for individual Field implementations have:
21  * - different input
22  * - possibly different EPETCT_EQ tests, but rather have majority common
23  */
24 
25 #ifndef field_algo_base_HH_
26 #define field_algo_base_HH_
27 
28 #include <string.h> // for memcpy
29 #include <boost/type_traits/is_same.hpp> // for is_same
30 #include <limits> // for numeric_limits
31 #include <memory> // for shared_ptr
32 #include <ostream> // for operator<<
33 #include <string> // for string
34 #include <utility> // for make_pair, pair
35 #include <vector> // for vector
36 #include <armadillo> // for operator%, operator<<
37 #include "fields/field_values.hh" // for FieldValue<>::Enum, FieldV...
38 #include "fields/field_flag.hh"
39 #include "input/type_selection.hh" // for Selection
40 #include "mesh/point.hh" // for Space
41 #include "mesh/accessors.hh"
42 #include "system/asserts.hh" // for Assert, ASSERT
43 #include "tools/time_governor.hh" // for TimeStep
44 
45 class Mesh;
46 class UnitSI;
47 class DOFHandlerMultiDim;
48 namespace Input {
49  class AbstractRecord;
50  class Record;
51  namespace Type {
52  class Abstract;
53  class Instance;
54  class Record;
55  }
56 }
57 template <int spacedim> class ElementAccessor;
58 
59 
60 
61 /**
62  * Indication of special field states. Returned by Field<>::field_result.
63  * Individual states have values corresponding to week ordering of the states according
64  * to the exactness of the value. May possibly be helpful in implementation, e.g.
65  * one can use (field_result >= result_constant) to check that the field is constant on given region.
66  */
67 typedef enum {
68  result_none=0, // field not set
69  result_other=1, // field initialized but no particular result information
70  result_constant=2, // spatially constant result
71  result_zeros=10, // zero scalar, vector, or tensor
72  result_ones=20, // all elements equal to 1.0
73  result_eye=21 // identity tensor
74 
75 } FieldResult;
76 
77 /// Helper struct stores data for initizalize descentants of \p FieldAlgorithmBase.
79  /// Full constructor
80  FieldAlgoBaseInitData(std::string field_name, unsigned int n_comp, const UnitSI &unit_si, std::pair<double, double> limits, FieldFlag::Flags flags)
81  : field_name_(field_name), n_comp_(n_comp), unit_si_(unit_si), limits_(limits), flags_(flags) {}
82  /// Simplified constructor, set limit values automatically (used in unit tests)
83  FieldAlgoBaseInitData(std::string field_name, unsigned int n_comp, const UnitSI &unit_si)
84  : field_name_(field_name), n_comp_(n_comp), unit_si_(unit_si),
85  limits_( std::make_pair(-std::numeric_limits<double>::max(), std::numeric_limits<double>::max()) ),
86  flags_(FieldFlag::declare_input & FieldFlag::equation_input & FieldFlag::allow_output) {}
87 
88  std::string field_name_;
89  unsigned int n_comp_;
90  const UnitSI &unit_si_;
91  std::pair<double, double> limits_;
93 };
94 
95 
96 
97 
98 /// Declaration of exception.
99 TYPEDEF_ERR_INFO(EI_Field, std::string);
100 DECLARE_INPUT_EXCEPTION(ExcUndefElementValue,
101  << "Values of some elements of FieldFE " << EI_Field::qval << " is undefined.\n"
102  << "Please specify in default_value key.\n");
103 
104 
105 /**
106  * Base class for space-time function classes.
107  */
108 template <int spacedim, class Value>
110 public:
111  // expose template parameters
112  typedef typename Space<spacedim>::Point Point;
113  static const unsigned int spacedim_=spacedim;
115 
116 
117  /**
118  * Kind of default constructor , with possible setting of the initial time.
119  * Fields that returns variable size vectors accepts number of components @p n_comp.
120  */
121  FieldAlgorithmBase(unsigned int n_comp=0);
122 
123  /**
124  * Returns template parameters as string in order to distinguish name of Abstracts
125  * for initialization of different instances of the FieldBase template.
126  */
127  static std::string template_name();
128 
129  /**
130  * Returns whole tree of input types for FieldBase with all descendants based on element input type (namely for FieldConstant)
131  * given by element_input_type pointer.
132  */
133  static Input::Type::Abstract & get_input_type();
134 
135  /**
136  * Returns parameterized whole tree of input types for FieldBase with all descendants based on element input type (namely
137  * for FieldConstant) given by element_input_type pointer.
138  */
139  static const Input::Type::Instance & get_input_type_instance( Input::Type::Selection value_selection=Input::Type::Selection() );
140 
141  /**
142  * Returns auxiliary record with keys common to all field algorithms.
143  */
144  static const Input::Type::Record & get_field_algo_common_keys();
145 
146  /**
147  * This static method gets accessor to abstract record with function input,
148  * dispatch to correct constructor and initialize appropriate function object from the input.
149  * Returns shared pointer to FunctionBase<>.
150  */
151  static std::shared_ptr< FieldAlgorithmBase<spacedim, Value> >
152  function_factory(const Input::AbstractRecord &rec, const struct FieldAlgoBaseInitData& init_data);
153 
154  /**
155  * Function can provide way to initialize itself from the input data.
156  *
157  * TODO: make protected, should be called through function factory
158  */
159  virtual void init_from_input(const Input::Record &rec, const struct FieldAlgoBaseInitData& init_data);
160 
161  /**
162  * Set new time value. Some Fields may and some may not implement time dependent values and
163  * possibly various types of interpolation. There can not be unified approach to interpolation (at least not on this abstraction level)
164  * since some fields (FieldFormula, FieldPython) provides naturally time dependent functions other fields like (FieldConstant, ...), however,
165  * can be equipped by various time interpolation schemes. In future, we obviously need time interpolation of higher order so that
166  * we can use ODE integrators of higher order.
167  *
168  * The method returns true if the value of the field has changed in the new time step.
169  */
170  virtual bool set_time(const TimeStep &time);
171 
172  /**
173  * Is used only by some Field implementations, but can be used to check validity of incoming ElementAccessor in value methods.
174  *
175  * Optional parameter @p boundary_domain can be used to specify, that the field will be evaluated only on the boundary part of the mesh.
176  * TODO: make separate mesh for the boundary, then we can drop this parameter.
177  */
178  virtual void set_mesh(const Mesh *mesh, bool boundary_domain);
179 
180  /**
181  * Sets @p component_idx_
182  */
183  void set_component_idx(unsigned int idx)
184  { this->component_idx_ = idx; }
185 
186  /**
187  * Returns number of rows, i.e. number of components for variable size vectors. For values of fixed size returns zero.
188  */
189  unsigned int n_comp() const;
190 
191  /**
192  * Special field values spatially constant. Could allow optimization of tensor multiplication and
193  * tensor or vector addition. field_result_ should be set in constructor and in set_time method of particular Field implementation.
194  */
196  { return field_result_;}
197 
198  /**
199  * Method for getting some information about next time where the function change its character.
200  * Used to add appropriate TimeMarks.
201  * TODO: think what kind of information we may need, is the next time value enough?
202  */
203  virtual double next_change_time()
204  { ASSERT(false).error("Not implemented yet."); return 0.0; }
205 
206  /**
207  * Returns one value in one given point @p on an element given by ElementAccessor @p elm.
208  * It returns reference to he actual value in order to avoid temporaries for vector and tensor values.
209  *
210  * This method just call the later one @p value(Point, ElementAccessor, Value) and drops the FieldResult.
211  *
212  * Usual implementation of this method fills @p member r_value_ through unified envelope @p value_ as general tensor
213  * and then returns member @p r_value_. However, some particular Fields may have result stored elsewhere, in such a case
214  * the reference to the result can be returned directly without using the member @p value_. Keeping such wide space for optimization
215  * has drawback in slow generic implementation of the @p value_list method that fills whole vector of values for vector of points.
216  * Its generic implementation has to copy all values instead of directly store them into the vector of result values.
217  *
218  * So the best practice when implementing @p value and @value_list methods in particular FieldBase descendant is
219  * implement some thing like value(point, elm, Value::return_type &value) and using
220  * s having in part
221  *
222  */
223  virtual typename Value::return_type const &value(const Point &p, const ElementAccessor<spacedim> &elm)=0;
224 
225  /**
226  * Returns std::vector of scalar values in several points at once. The base class implements
227  * trivial implementation using the @p value(,,) method. This is not optimal as it involves lot of virtual calls,
228  * but this overhead can be negligible for more complex fields as Python of Formula.
229  *
230  * FieldAlgorithmBase provides a slow implementation using the value() method. Derived Field can implement its value_list method
231  * as call of FieldAlgoritmBase<...>::value_list().
232  */
233  virtual void value_list(const std::vector< Point > &point_list, const ElementAccessor<spacedim> &elm,
235 
236  /**
237  * Postponed setter of Dof handler for FieldFE. For other types of fields has no effect.
238  */
239  virtual void set_native_dh(std::shared_ptr<DOFHandlerMultiDim>)
240  {}
241 
242  /**
243  * Return true if field is only dependent on time.
244  */
245  inline bool is_constant_in_space() const {
246  return is_constant_in_space_;
247  }
248 
249  /**
250  * Virtual destructor.
251  */
252  virtual ~FieldAlgorithmBase() {}
253 
254 
255 protected:
256  /// Init value of @p unit_conversion_coefficient_ from input
257  void init_unit_conversion_coefficient(const Input::Record &rec, const struct FieldAlgoBaseInitData& init_data);
258  /// Actual time level; initial value is -infinity.
260  /// Last value, prevents passing large values (vectors) by value.
262  typename Value::return_type r_value_;
263  /// Indicator of particular values (zero, one) constant over space.
265  /// Specify if the field is part of a MultiField and which component it is
266  unsigned int component_idx_;
267  /// Coeficient of conversion of user-defined unit
269  /// Flag detects that field is only dependent on time
271 };
272 
273 
274 #endif /* FUNCTION_BASE_HH_ */
TimeStep time_
Actual time level; initial value is -infinity.
virtual double next_change_time()
TYPEDEF_ERR_INFO(EI_KeyName, const string)
unsigned int component_idx_
Specify if the field is part of a MultiField and which component it is.
FieldResult field_result_
Indicator of particular values (zero, one) constant over space.
Abstract linear system class.
Definition: balance.hh:37
FieldFlag::Flags flags_
Definitions of ASSERTS.
Definition: mesh.h:76
Helper class that stores data of generic types.
Definition: type_generic.hh:89
Helper struct stores data for initizalize descentants of FieldAlgorithmBase.
#define ASSERT(expr)
Allow use shorter versions of macro names if these names is not used with external library...
Definition: asserts.hh:347
virtual void set_native_dh(std::shared_ptr< DOFHandlerMultiDim >)
Value::return_type r_value_
Basic time management class.
static constexpr bool value
Definition: json.hpp:87
double unit_conversion_coefficient_
Coeficient of conversion of user-defined unit.
bool is_constant_in_space() const
FieldResult field_result() const
arma::vec::fixed< spacedim > Point
Definition: point.hh:42
Accessor to the data with type Type::Record.
Definition: accessors.hh:292
Provides the numbering of the finite element degrees of freedom on the computational mesh...
Definition: dofhandler.hh:151
FieldAlgoBaseInitData(std::string field_name, unsigned int n_comp, const UnitSI &unit_si)
Simplified constructor, set limit values automatically (used in unit tests)
Space< spacedim >::Point Point
Class for declaration of polymorphic Record.
Accessor to the polymorphic input data of a type given by an AbstracRecord object.
Definition: accessors.hh:459
FieldResult
const UnitSI & unit_si_
bool is_constant_in_space_
Flag detects that field is only dependent on time.
Value value_
Last value, prevents passing large values (vectors) by value.
virtual ~FieldAlgorithmBase()
void set_component_idx(unsigned int idx)
std::pair< double, double > limits_
Record type proxy class.
Definition: type_record.hh:182
FieldAlgoBaseInitData(std::string field_name, unsigned int n_comp, const UnitSI &unit_si, std::pair< double, double > limits, FieldFlag::Flags flags)
Full constructor.
Class for representation SI units of Fields.
Definition: unit_si.hh:40
DECLARE_INPUT_EXCEPTION(ExcInputMessage,<< EI_Message::val)
Simple input exception that accepts just string message.
Representation of one time step..
Template for classes storing finite set of named values.