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assembly_base.hh
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1 /*!
2  *
3  * Copyright (C) 2015 Technical University of Liberec. All rights reserved.
4  *
5  * This program is free software; you can redistribute it and/or modify it under
6  * the terms of the GNU General Public License version 3 as published by the
7  * Free Software Foundation. (http://www.gnu.org/licenses/gpl-3.0.en.html)
8  *
9  * This program is distributed in the hope that it will be useful, but WITHOUT
10  * ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
11  * FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
12  *
13  *
14  * @file assembly_base.hh
15  * @brief
16  */
17 
18 #ifndef ASSEMBLY_BASE_HH_
19 #define ASSEMBLY_BASE_HH_
20 
21 
24 #include "fields/eval_points.hh"
26 #include "fem/update_flags.hh"
27 
28 
29 
30 /**
31  * Base class define empty methods, these methods can be overwite in descendants.
32  */
33 template <unsigned int dim>
35 {
36 public:
41 
42  /// Constructor
43  AssemblyBase(unsigned int quad_order) {
44  quad_ = new QGauss(dim, 2*quad_order);
45  quad_low_ = new QGauss(dim-1, 2*quad_order);
46  }
47 
48  /// Destructor
49  virtual ~AssemblyBase() {
50  delete quad_;
51  delete quad_low_;
52  }
53 
54  /// Assembles the volume integrals on cell.
55  virtual inline void cell_integral(FMT_UNUSED DHCellAccessor cell, FMT_UNUSED unsigned int element_patch_idx) {}
56 
57  /// Assembles the fluxes on the boundary.
58  virtual inline void boundary_side_integral(FMT_UNUSED DHCellSide cell_side) {}
59 
60  /// Assembles the fluxes between sides on the edge.
61  virtual inline void edge_integral(FMT_UNUSED RangeConvert<DHEdgeSide, DHCellSide> edge_side_range) {}
62 
63  /// Assembles the fluxes between elements of different dimensions.
64  virtual inline void dimjoin_intergral(FMT_UNUSED DHCellAccessor cell_lower_dim, FMT_UNUSED DHCellSide neighb_side) {}
65 
66  /// Method prepares object before assemblation (e.g. balance, ...).
67  virtual void begin() {}
68 
69  /// Method finishes object after assemblation (e.g. balance, ...).
70  virtual void end() {}
71 
72  /// Getter of active_integrals.
73  inline int n_active_integrals() const {
74  return active_integrals_;
75  }
76 
77  /// Create integrals according to dim of assembly object
78  void create_integrals(std::shared_ptr<EvalPoints> eval_points, AssemblyIntegrals &integrals) {
80  ASSERT_PTR(quad_).error("Data member 'quad_' must be initialized if you use bulk integral!\n");
81  integrals_.bulk_ = eval_points->add_bulk<dim>(*quad_);
82  integrals.bulk_[dim-1] = integrals_.bulk_;
83  }
85  ASSERT_PTR(quad_low_).error("Data member 'quad_low_' must be initialized if you use edge integral!\n");
86  integrals_.edge_ = eval_points->add_edge<dim>(*quad_low_);
87  integrals.edge_[dim-1] = integrals_.edge_;
88  }
89  if ((dim>1) && (active_integrals_ & ActiveIntegrals::coupling)) {
90  ASSERT_PTR(quad_).error("Data member 'quad_' must be initialized if you use coupling integral!\n");
91  ASSERT_PTR(quad_low_).error("Data member 'quad_low_' must be initialized if you use coupling integral!\n");
92  integrals_.coupling_ = eval_points->add_coupling<dim>(*quad_low_);
93  integrals.coupling_[dim-2] = integrals_.coupling_;
94  }
96  ASSERT_PTR(quad_).error("Data member 'quad_' must be initialized if you use boundary integral!\n");
97  ASSERT_PTR(quad_low_).error("Data member 'quad_low_' must be initialized if you use boundary integral!\n");
98  integrals_.boundary_ = eval_points->add_boundary<dim>(*quad_low_);
99  integrals.boundary_[dim-1] = integrals_.boundary_;
100  }
101  }
102 
103  /// Return BulkPoint range of appropriate dimension
104  inline Range< BulkPoint > bulk_points(unsigned int element_patch_idx) const {
105  return integrals_.bulk_->points(element_patch_idx, element_cache_map_);
106  }
107 
108  /// Return EdgePoint range of appropriate dimension
109  inline Range< EdgePoint > edge_points(const DHCellSide &cell_side) const {
110  ASSERT_DBG( cell_side.dim() > 0 ).error("Invalid cell dimension, must be 1, 2 or 3!\n");
111  return integrals_.edge_->points(cell_side, element_cache_map_);
112  }
113 
114  /// Return CouplingPoint range of appropriate dimension
115  inline Range< CouplingPoint > coupling_points(const DHCellSide &cell_side) const {
116  ASSERT_DBG( cell_side.dim() > 1 ).error("Invalid cell dimension, must be 2 or 3!\n");
117  return integrals_.coupling_->points(cell_side, element_cache_map_);
118  }
119 
120  /// Return BoundaryPoint range of appropriate dimension
121  inline Range< BoundaryPoint > boundary_points(const DHCellSide &cell_side) const {
122  ASSERT_DBG( cell_side.dim() > 0 ).error("Invalid cell dimension, must be 1, 2 or 3!\n");
123  return integrals_.boundary_->points(cell_side, element_cache_map_);
124  }
125 
126  /// Assembles the cell integrals for the given dimension.
127  virtual inline void assemble_cell_integrals(const RevertableList<BulkIntegralData> &bulk_integral_data) {
128  for (unsigned int i=0; i<bulk_integral_data.permanent_size(); ++i) {
129  if (bulk_integral_data[i].cell.dim() != dim) continue;
130  this->cell_integral(bulk_integral_data[i].cell, element_cache_map_->position_in_cache(bulk_integral_data[i].cell.elm_idx()));
131  }
132  // Possibly optimization but not so fast as we would assume (needs change interface of cell_integral)
133  /*for (unsigned int i=0; i<element_cache_map_->n_elements(); ++i) {
134  unsigned int elm_start = element_cache_map_->element_chunk_begin(i);
135  if (element_cache_map_->eval_point_data(elm_start).i_eval_point_ != 0) continue;
136  this->cell_integral(i, element_cache_map_->eval_point_data(elm_start).dh_loc_idx_);
137  }*/
138  }
139 
140  /// Assembles the boundary side integrals for the given dimension.
141  inline void assemble_boundary_side_integrals(const RevertableList<BoundaryIntegralData> &boundary_integral_data) {
142  for (unsigned int i=0; i<boundary_integral_data.permanent_size(); ++i) {
143  if (boundary_integral_data[i].side.dim() != dim) continue;
144  this->boundary_side_integral(boundary_integral_data[i].side);
145  }
146  }
147 
148  /// Assembles the edge integrals for the given dimension.
149  inline void assemble_edge_integrals(const RevertableList<EdgeIntegralData> &edge_integral_data) {
150  for (unsigned int i=0; i<edge_integral_data.permanent_size(); ++i) {
151  auto range = edge_integral_data[i].edge_side_range;
152  if (range.begin()->dim() != dim) continue;
153  this->edge_integral(edge_integral_data[i].edge_side_range);
154  }
155  }
156 
157  /// Assembles the neighbours integrals for the given dimension.
158  inline void assemble_neighbour_integrals(const RevertableList<CouplingIntegralData> &coupling_integral_data) {
159  for (unsigned int i=0; i<coupling_integral_data.permanent_size(); ++i) {
160  if (coupling_integral_data[i].side.dim() != dim) continue;
161  this->dimjoin_intergral(coupling_integral_data[i].cell, coupling_integral_data[i].side);
162  }
163  }
164 
165 protected:
166  /// Set of integral of given dimension necessary in assemblation
167  struct DimIntegrals {
168  std::shared_ptr<BulkIntegral> bulk_; ///< Bulk integrals of elements
169  std::shared_ptr<EdgeIntegral> edge_; ///< Edge integrals between elements of same dimensions
170  std::shared_ptr<CouplingIntegral> coupling_; ///< Coupling integrals between elements of dimensions dim and dim-1
171  std::shared_ptr<BoundaryIntegral> boundary_; ///< Boundary integrals betwwen side and boundary element of dim-1
172  };
173 
174  /**
175  * Default constructor.
176  *
177  * Be aware if you use this constructor. Quadrature objects must be initialized manually in descendant.
178  */
180  : quad_(nullptr), quad_low_(nullptr) {}
181 
182  /// Print update flags to string format.
183  std::string print_update_flags(UpdateFlags u) const {
184  std::stringstream s;
185  s << u;
186  return s.str();
187  }
188 
189  Quadrature *quad_; ///< Quadrature used in assembling methods.
190  Quadrature *quad_low_; ///< Quadrature used in assembling methods (dim-1).
191  int active_integrals_; ///< Holds mask of active integrals.
192  DimIntegrals integrals_; ///< Set of used integrals.
193  ElementCacheMap *element_cache_map_; ///< ElementCacheMap shared with GenericAssembly object.
194 };
195 
196 
197 #endif /* ASSEMBLY_BASE_HH_ */
AssemblyBase::DimIntegrals::boundary_
std::shared_ptr< BoundaryIntegral > boundary_
Boundary integrals betwwen side and boundary element of dim-1.
Definition: assembly_base.hh:171
AssemblyIntegrals::coupling_
std::array< std::shared_ptr< CouplingIntegral >, 2 > coupling_
Coupling integrals between elements of dimensions 1-2, 2-3.
Definition: generic_assembly.hh:44
AssemblyBase::print_update_flags
std::string print_update_flags(UpdateFlags u) const
Print update flags to string format.
Definition: assembly_base.hh:183
AssemblyBase::~AssemblyBase
virtual ~AssemblyBase()
Destructor.
Definition: assembly_base.hh:49
AssemblyIntegrals
Set of all used integral necessary in assemblation.
Definition: generic_assembly.hh:41
AssemblyBase::edge_points
Range< EdgePoint > edge_points(const DHCellSide &cell_side) const
Return EdgePoint range of appropriate dimension.
Definition: assembly_base.hh:109
ElementCacheMap::position_in_cache
unsigned int position_in_cache(unsigned mesh_elm_idx, bool bdr=false) const
Return position of element stored in ElementCacheMap.
Definition: field_value_cache.hh:215
AssemblyBase::quad_low_
Quadrature * quad_low_
Quadrature used in assembling methods (dim-1).
Definition: assembly_base.hh:190
AssemblyBase::assemble_boundary_side_integrals
void assemble_boundary_side_integrals(const RevertableList< BoundaryIntegralData > &boundary_integral_data)
Assembles the boundary side integrals for the given dimension.
Definition: assembly_base.hh:141
GenericAssemblyBase::CouplingIntegralData
Definition: generic_assembly.hh:103
AssemblyBase::begin
virtual void begin()
Method prepares object before assemblation (e.g. balance, ...).
Definition: assembly_base.hh:67
ElementCacheMap
Directing class of FieldValueCache.
Definition: field_value_cache.hh:151
eval_points.hh
RevertableList::permanent_size
std::size_t permanent_size() const
Return permanent size of list.
Definition: revertable_list.hh:71
ASSERT_DBG
#define ASSERT_DBG(expr)
Definition: include_fadbad.hh:28
AssemblyIntegrals::edge_
std::array< std::shared_ptr< EdgeIntegral >, 3 > edge_
Edge integrals between elements of dimensions 1, 2, 3.
Definition: generic_assembly.hh:43
AssemblyBase::end
virtual void end()
Method finishes object after assemblation (e.g. balance, ...).
Definition: assembly_base.hh:70
AssemblyBase::DimIntegrals::bulk_
std::shared_ptr< BulkIntegral > bulk_
Bulk integrals of elements.
Definition: assembly_base.hh:168
AssemblyBase::assemble_cell_integrals
virtual void assemble_cell_integrals(const RevertableList< BulkIntegralData > &bulk_integral_data)
Assembles the cell integrals for the given dimension.
Definition: assembly_base.hh:127
DHCellSide::dim
unsigned int dim() const
Return dimension of element appropriate to the side.
Definition: dh_cell_accessor.hh:214
AssemblyBase::EdgeIntegralData
GenericAssemblyBase::EdgeIntegralData EdgeIntegralData
Definition: assembly_base.hh:38
AssemblyBase::BulkIntegralData
GenericAssemblyBase::BulkIntegralData BulkIntegralData
Definition: assembly_base.hh:37
AssemblyBase::AssemblyBase
AssemblyBase()
Definition: assembly_base.hh:179
AssemblyBase::dimjoin_intergral
virtual void dimjoin_intergral(FMT_UNUSED DHCellAccessor cell_lower_dim, FMT_UNUSED DHCellSide neighb_side)
Assembles the fluxes between elements of different dimensions.
Definition: assembly_base.hh:64
GenericAssemblyBase::BulkIntegralData
Definition: generic_assembly.hh:60
AssemblyBase::integrals_
DimIntegrals integrals_
Set of used integrals.
Definition: assembly_base.hh:192
DHCellSide
Side accessor allows to iterate over sides of DOF handler cell.
Definition: dh_cell_accessor.hh:176
AssemblyBase::BoundaryIntegralData
GenericAssemblyBase::BoundaryIntegralData BoundaryIntegralData
Definition: assembly_base.hh:40
AssemblyBase::AssemblyBase
AssemblyBase(unsigned int quad_order)
Constructor.
Definition: assembly_base.hh:43
RangeConvert< DHEdgeSide, DHCellSide >
AssemblyBase::n_active_integrals
int n_active_integrals() const
Getter of active_integrals.
Definition: assembly_base.hh:73
AssemblyIntegrals::bulk_
std::array< std::shared_ptr< BulkIntegral >, 3 > bulk_
Bulk integrals of elements of dimensions 1, 2, 3.
Definition: generic_assembly.hh:42
generic_assembly.hh
quadrature_lib.hh
Definitions of particular quadrature rules on simplices.
AssemblyBase::assemble_edge_integrals
void assemble_edge_integrals(const RevertableList< EdgeIntegralData > &edge_integral_data)
Assembles the edge integrals for the given dimension.
Definition: assembly_base.hh:149
GenericAssemblyBase::BoundaryIntegralData
Definition: generic_assembly.hh:126
GenericAssemblyBase::EdgeIntegralData
Definition: generic_assembly.hh:81
RevertableList< BulkIntegralData >
coupling
@ coupling
Definition: generic_assembly.hh:35
AssemblyBase::DimIntegrals::edge_
std::shared_ptr< EdgeIntegral > edge_
Edge integrals between elements of same dimensions.
Definition: assembly_base.hh:169
QGauss
Symmetric Gauss-Legendre quadrature formulae on simplices.
Definition: quadrature_lib.hh:34
AssemblyBase::boundary_side_integral
virtual void boundary_side_integral(FMT_UNUSED DHCellSide cell_side)
Assembles the fluxes on the boundary.
Definition: assembly_base.hh:58
AssemblyBase::bulk_points
Range< BulkPoint > bulk_points(unsigned int element_patch_idx) const
Return BulkPoint range of appropriate dimension.
Definition: assembly_base.hh:104
bulk
@ bulk
Definition: generic_assembly.hh:33
Range
Range helper class.
Definition: range_wrapper.hh:65
DHCellAccessor
Cell accessor allow iterate over DOF handler cells.
Definition: dh_cell_accessor.hh:43
update_flags.hh
Enum type UpdateFlags indicates which quantities are to be recomputed on each finite element cell.
AssemblyBase::assemble_neighbour_integrals
void assemble_neighbour_integrals(const RevertableList< CouplingIntegralData > &coupling_integral_data)
Assembles the neighbours integrals for the given dimension.
Definition: assembly_base.hh:158
AssemblyBase::create_integrals
void create_integrals(std::shared_ptr< EvalPoints > eval_points, AssemblyIntegrals &integrals)
Create integrals according to dim of assembly object.
Definition: assembly_base.hh:78
field_value_cache.hh
AssemblyBase::active_integrals_
int active_integrals_
Holds mask of active integrals.
Definition: assembly_base.hh:191
AssemblyBase::DimIntegrals
Set of integral of given dimension necessary in assemblation.
Definition: assembly_base.hh:167
AssemblyBase::cell_integral
virtual void cell_integral(FMT_UNUSED DHCellAccessor cell, FMT_UNUSED unsigned int element_patch_idx)
Assembles the volume integrals on cell.
Definition: assembly_base.hh:55
UpdateFlags
UpdateFlags
Enum type UpdateFlags indicates which quantities are to be recomputed on each finite element cell.
Definition: update_flags.hh:67
AssemblyBase
Definition: assembly_base.hh:34
AssemblyBase::edge_integral
virtual void edge_integral(FMT_UNUSED RangeConvert< DHEdgeSide, DHCellSide > edge_side_range)
Assembles the fluxes between sides on the edge.
Definition: assembly_base.hh:61
AssemblyBase::CouplingIntegralData
GenericAssemblyBase::CouplingIntegralData CouplingIntegralData
Definition: assembly_base.hh:39
edge
@ edge
Definition: generic_assembly.hh:34
boundary
@ boundary
Definition: generic_assembly.hh:36
AssemblyBase::coupling_points
Range< CouplingPoint > coupling_points(const DHCellSide &cell_side) const
Return CouplingPoint range of appropriate dimension.
Definition: assembly_base.hh:115
ASSERT_PTR
#define ASSERT_PTR(ptr)
Definition of assert macro checking non-null pointer (PTR)
Definition: asserts.hh:336
Quadrature
Base class for quadrature rules on simplices in arbitrary dimensions.
Definition: quadrature.hh:48
AssemblyBase::boundary_points
Range< BoundaryPoint > boundary_points(const DHCellSide &cell_side) const
Return BoundaryPoint range of appropriate dimension.
Definition: assembly_base.hh:121
AssemblyBase::DimIntegrals::coupling_
std::shared_ptr< CouplingIntegral > coupling_
Coupling integrals between elements of dimensions dim and dim-1.
Definition: assembly_base.hh:170
AssemblyBase::element_cache_map_
ElementCacheMap * element_cache_map_
ElementCacheMap shared with GenericAssembly object.
Definition: assembly_base.hh:193
AssemblyBase::quad_
Quadrature * quad_
Quadrature used in assembling methods.
Definition: assembly_base.hh:189
FMT_UNUSED
#define FMT_UNUSED
Definition: posix.h:75
AssemblyIntegrals::boundary_
std::array< std::shared_ptr< BoundaryIntegral >, 3 > boundary_
Boundary integrals betwwen elements of dimensions 1, 2, 3 and boundaries.
Definition: generic_assembly.hh:45