21 #ifndef PATCH_FE_VALUES_HH_
22 #define PATCH_FE_VALUES_HH_
50 template <
class ValueType>
70 template <
class ValueType>
95 template <
class ValueType>
114 unsigned int n_dofs_side,
unsigned int op_idx_bulk,
unsigned int op_idx_side,
unsigned int join_idx)
174 template<
unsigned int dim>
183 template<
unsigned int FE_dim>
186 if (fe_sys !=
nullptr) {
187 return fe_sys->
fe()[component_idx];
189 ASSERT_EQ(component_idx, 0).warning(
"Non-zero component_idx can only be used for FESystem.");
201 template<
unsigned int FE_dim>
205 arma::mat shape_values(fe->n_dofs(), fe->n_components());
206 for (
unsigned int i=0; i<q->
size(); i++)
208 for (
unsigned int j=0; j<fe->n_dofs(); j++)
210 for (
unsigned int c=0; c<fe->n_components(); c++)
211 shape_values(j,c) = fe->shape_value(j, q->
point<FE_dim>(i), c);
213 ref_shape_vals[i][j] = trans(shape_values.row(j));
217 return ref_shape_vals;
228 template<
unsigned int FE_dim>
232 arma::mat shape_values(fe->n_dofs(), fe->n_components());
234 for (
unsigned int sid=0; sid<FE_dim+1; sid++) {
236 for (
unsigned int i=0; i<quad.size(); i++)
238 for (
unsigned int j=0; j<fe->n_dofs(); j++)
240 for (
unsigned int c=0; c<fe->n_components(); c++) {
241 shape_values(j,c) = fe->shape_value(j, quad.template point<FE_dim>(i), c);
244 ref_shape_vals[sid][i][j] = trans(shape_values.row(j));
249 return ref_shape_vals;
254 template<
unsigned int dim>
299 auto fe_component = this->
fe_comp(
fe_, component_idx);
300 ASSERT_EQ(fe_component->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of scalar_shape accessor must be FEScalar!\n");
306 for (
unsigned int j = 0; j < fe_component->n_dofs(); j++) {
307 shape_values[j][i] = ref_shape_vals[i][j][0];
333 auto fe_component = this->
fe_comp(
fe_, component_idx);
334 ASSERT_EQ(fe_component->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of grad_scalar_shape accessor must be FEScalar!\n");
340 bulk_reinit::ptop_scalar_shape_grads<dim>(operations, ref_shape_grads, scalar_shape_grads_op_idx);
364 for (
unsigned int i_pt=0; i_pt<q->
size(); i_pt++)
366 for (
unsigned int i_dof=0; i_dof<fe->n_dofs(); i_dof++)
369 for (
unsigned int c=0; c<fe->n_components(); c++)
370 grad.col(c) += fe->shape_grad(i_dof, q->
point<dim>(i_pt), c);
372 ref_shape_grads[i_pt][i_dof] = grad;
376 return ref_shape_grads;
380 std::shared_ptr< FiniteElement<dim> >
fe_;
384 template<
unsigned int dim>
426 auto fe_component = this->
fe_comp(
fe_, component_idx);
427 ASSERT_EQ(fe_component->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of scalar_shape accessor must be FEScalar!\n");
435 for (
unsigned int s=0; s<dim+1; ++s)
437 for (
unsigned int j = 0; j < fe_component->n_dofs(); j++) {
438 shape_values[s][i][j] = ref_shape_vals[s][i][j][0];
453 auto fe_component = this->
fe_comp(
fe_, component_idx);
454 ASSERT_EQ(fe_component->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of grad_scalar_shape accessor must be FEScalar!\n");
460 side_reinit::ptop_scalar_shape_grads<dim>(operations, el_table, ref_shape_grads, scalar_shape_grads_op_idx);
482 for (
unsigned int sid=0; sid<dim+1; sid++) {
484 for (
unsigned int i_pt=0; i_pt<quad.size(); i_pt++)
486 for (
unsigned int i_dof=0; i_dof<fe->n_dofs(); i_dof++)
489 for (
unsigned int c=0; c<fe->n_components(); c++)
490 grad.col(c) += fe->shape_grad(i_dof, quad.template point<dim>(i_pt), c);
492 ref_shape_grads[sid][i_pt][i_dof] = grad;
497 return ref_shape_grads;
501 std::shared_ptr< FiniteElement<dim> >
fe_;
505 template<
unsigned int dim>
522 ASSERT_EQ(fe_component_low->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of scalar_shape accessor must be FEScalar!\n");
527 for (
unsigned int j = 0; j < fe_component_low->n_dofs(); j++) {
528 shape_values_bulk[j][i] = ref_shape_vals_bulk[i][j][0];
539 ASSERT_EQ(fe_component_high->fe_type(),
FEType::FEScalar).error(
"Type of FiniteElement of scalar_shape accessor must be FEScalar!\n");
546 for (
unsigned int s=0; s<dim+1; ++s)
548 for (
unsigned int j = 0; j < fe_component_high->n_dofs(); j++) {
549 shape_values_side[s][i][j] = ref_shape_vals_side[s][i][j][0];
559 fe_component_low->n_dofs(), fe_component_high->n_dofs(), op_idx_bulk, op_idx_side, 0) );
560 unsigned int end_idx = fe_component_low->n_dofs() + fe_component_high->n_dofs();
562 fe_component_low->n_dofs(), fe_component_high->n_dofs(), op_idx_bulk, op_idx_side, end_idx) );
591 template<
unsigned int spacedim = 3>
646 used_quads_[0] =
false; used_quads_[1] =
false;
650 : asm_arena_(1024 * 1024, 256),
651 patch_arena_(nullptr),
660 used_quads_[0] =
false; used_quads_[1] =
false;
667 if (patch_arena_!=
nullptr)
673 if (is_bulk)
return patch_point_vals_bulk_[dim-1].get_quadrature();
674 else return patch_point_vals_side_[dim-1].get_quadrature();
684 template<
unsigned int DIM>
687 if ( _quadrature.
dim() == DIM ) {
688 used_quads_[0] =
true;
689 patch_point_vals_bulk_[DIM-1].initialize();
691 used_quads_[1] =
true;
692 patch_point_vals_side_[DIM-1].initialize();
698 patch_arena_ = asm_arena_.get_child_arena();
699 for (
unsigned int i=0; i<3; ++i) {
700 if (used_quads_[0]) patch_point_vals_bulk_[i].init_finalize(patch_arena_);
701 if (used_quads_[1]) patch_point_vals_side_[i].init_finalize(patch_arena_);
708 for (
unsigned int i=0; i<3; ++i) {
709 if (used_quads_[0]) patch_point_vals_bulk_[i].reset();
710 if (used_quads_[1]) patch_point_vals_side_[i].reset();
712 patch_arena_->reset();
718 for (
unsigned int i=0; i<3; ++i) {
719 if (used_quads_[0]) patch_point_vals_bulk_[i].reinit_patch();
720 if (used_quads_[1]) patch_point_vals_side_[i].reinit_patch();
727 template<
unsigned int dim>
729 ASSERT((dim>=0) && (dim<=3))(dim).error(
"Dimension must be 0, 1, 2 or 3.");
734 template<
unsigned int dim>
736 ASSERT((dim>0) && (dim<=3))(dim).error(
"Dimension must be 1, 2 or 3.");
741 template<
unsigned int dim>
743 ASSERT((dim>0) && (dim<=3))(dim).error(
"Dimension must be 1, 2 or 3.");
748 template<
unsigned int dim>
751 return JoinValues<dim>(&patch_point_vals_bulk_[dim-2], &patch_point_vals_side_[dim-1], fe_);
758 for (
uint i=0; i<3; ++i) {
759 if (used_quads_[0]) patch_point_vals_bulk_[i].resize_tables(table_sizes.
elem_sizes_[0][i], table_sizes.
point_sizes_[0][i]);
760 if (used_quads_[1]) patch_point_vals_side_[i].resize_tables(table_sizes.
elem_sizes_[1][i], table_sizes.
point_sizes_[1][i]);
767 switch (cell.
dim()) {
770 return patch_point_vals_bulk_[0].register_element(coords, element_patch_idx);
774 return patch_point_vals_bulk_[1].register_element(coords, element_patch_idx);
778 return patch_point_vals_bulk_[2].register_element(coords, element_patch_idx);
790 for (
unsigned int n=0; n<cell_side.
dim(); n++)
791 for (
unsigned int c=0; c<spacedim; c++)
792 side_coords(c,n) = (*cell_side.
side().
node(n))[c];
796 switch (cell.
dim()) {
799 return patch_point_vals_side_[0].register_side(elm_coords, side_coords, cell_side.
side_idx());
803 return patch_point_vals_side_[1].register_side(elm_coords, side_coords, cell_side.
side_idx());
807 return patch_point_vals_side_[2].register_side(elm_coords, side_coords, cell_side.
side_idx());
818 return patch_point_vals_bulk_[cell.
dim()-1].register_bulk_point(elem_table_row, value_patch_idx, cell.
elm_idx(), i_point_on_elem);
823 return patch_point_vals_side_[cell_side.
dim()-1].register_side_point(elem_table_row, value_patch_idx, cell_side.
elem_idx(),
824 cell_side.
side_idx(), i_point_on_side);
829 stream << endl <<
"Table of patch FE data:" << endl;
830 for (
uint i=0; i<3; ++i) {
831 stream << std::setfill(
'-') << setw(100) <<
"" << endl;
832 stream <<
"Bulk, dimension " << (i+1) << endl;
833 patch_point_vals_bulk_[i].print_data_tables(stream, points, ints);
836 for (
uint i=0; i<3; ++i) {
837 stream << std::setfill(
'-') << setw(100) <<
"" << endl;
838 stream <<
"Side, dimension " << (i+1) << endl;
839 patch_point_vals_side_[i].print_data_tables(stream, points, ints);
841 stream << std::setfill(
'=') << setw(100) <<
"" << endl;
846 stream << endl <<
"Table of patch FE operations:" << endl;
847 for (
uint i=0; i<3; ++i) {
848 stream << std::setfill(
'-') << setw(100) <<
"" << endl;
849 stream <<
"Bulk, dimension " << (i+1) << endl;
850 patch_point_vals_bulk_[i].print_operations(stream, 0);
852 for (
uint i=0; i<3; ++i) {
853 stream << std::setfill(
'-') << setw(100) <<
"" << endl;
854 stream <<
"Side, dimension " << (i+1) << endl;
855 patch_point_vals_side_[i].print_operations(stream, 1);
857 stream << std::setfill(
'=') << setw(100) <<
"" << endl;
869 template <
class ValueType>
871 template <
class ValueType>
873 template <
class ValueType>
878 template <
class ValueType>
881 return patch_point_vals_.scalar_value(op_idx_, value_cache_idx);
887 return patch_point_vals_.vector_value(op_idx_, value_cache_idx);
893 return patch_point_vals_.tensor_value(op_idx_, value_cache_idx);
896 template <
class ValueType>
899 return patch_point_vals_.scalar_value(op_idx_, value_cache_idx);
905 return patch_point_vals_.vector_value(op_idx_, value_cache_idx);
911 return patch_point_vals_.tensor_value(op_idx_, value_cache_idx);
914 template <
class ValueType>
917 return patch_point_vals_.scalar_value(op_idx_, value_cache_idx, shape_idx);
923 return patch_point_vals_.vector_value(op_idx_, value_cache_idx, shape_idx);
929 return patch_point_vals_.tensor_value(op_idx_, value_cache_idx, shape_idx);
932 template <
class ValueType>
935 return patch_point_vals_.scalar_value(op_idx_, value_cache_idx, shape_idx);
941 return patch_point_vals_.vector_value(op_idx_, value_cache_idx, shape_idx);
946 unsigned int value_cache_idx = point.elm_cache_map()->element_eval_point(point.elem_patch_idx(), point.eval_point_idx());
947 return patch_point_vals_.tensor_value(op_idx_, value_cache_idx, shape_idx);
951 template <
class ValueType>
963 Vector vect; vect.zeros();
969 Tensor tens; tens.zeros();
973 template <
class ValueType>
985 Vector vect; vect.zeros();
991 Tensor tens; tens.zeros();
#define ASSERT_EQ(a, b)
Definition of comparative assert macro (EQual) only for debug mode.
std::vector< std::vector< std::vector< arma::vec > > > ref_shape_values_side(Quadrature *q, std::shared_ptr< FiniteElement< FE_dim >> fe)
Precomputed values of basis functions at the side quadrature points.
std::shared_ptr< FiniteElement< FE_dim > > fe_comp(std::shared_ptr< FiniteElement< FE_dim > > fe, uint component_idx)
Return FiniteElement of component_idx for FESystem or fe for other types.
std::vector< std::vector< arma::vec > > ref_shape_values_bulk(Quadrature *q, std::shared_ptr< FiniteElement< FE_dim >> fe)
Precomputed values of basis functions at the bulk quadrature points.
Base point accessor class.
const ElementCacheMap * elm_cache_map() const
unsigned int elem_patch_idx() const
unsigned int eval_point_idx() const
Return index in EvalPoints object.
ElQ< Scalar > JxW()
Register the product of Jacobian determinant and the quadrature weight at bulk quadrature points.
PatchPointValues< 3 > & patch_point_vals_
ElQ< Vector > coords()
Create bulk accessor of coords entity.
std::vector< std::vector< arma::mat > > ref_shape_gradients(std::shared_ptr< FiniteElement< dim >> fe)
Precomputed gradients of basis functions at the quadrature points.
ElQ< Scalar > determinant()
Create bulk accessor of jac determinant entity.
std::shared_ptr< FiniteElement< dim > > fe_
FeQ< Vector > grad_scalar_shape(uint component_idx=0)
Return the value of the function_no-th gradient shape function at the p bulk quadrature point.
FeQ< Scalar > scalar_shape(uint component_idx=0)
Return the value of the function_no-th shape function at the p bulk quadrature point.
BulkValues(PatchPointValues< 3 > &patch_point_vals, MixedPtr< FiniteElement > fe)
Constructor.
Cell accessor allow iterate over DOF handler cells.
unsigned int dim() const
Return dimension of element appropriate to cell.
unsigned int elm_idx() const
Return serial idx to element of loc_ele_idx_.
ElementAccessor< 3 > elm() const
Return ElementAccessor to element of loc_ele_idx_.
Side accessor allows to iterate over sides of DOF handler cell.
unsigned int elem_idx() const
Side side() const
Return Side of given cell and side_idx.
const DHCellAccessor & cell() const
Return DHCellAccessor appropriate to the side.
unsigned int dim() const
Return dimension of element appropriate to the side.
unsigned int side_idx() const
ElQ(PatchPointValues< 3 > &patch_point_vals, unsigned int op_idx)
Constructor.
unsigned int op_idx_
Index of operation in patch_point_vals_.operations vector.
ElQ()=delete
Forbidden default constructor.
PatchPointValues< 3 > & patch_point_vals_
Reference to PatchPointValues.
ValueType operator()(FMT_UNUSED const SidePoint &point)
ValueType operator()(FMT_UNUSED const BulkPoint &point)
int element_eval_point(unsigned int i_elem_in_cache, unsigned int i_eval_point) const
Compound finite element on dim dimensional simplex.
const std::vector< std::shared_ptr< FiniteElement< dim > > > & fe() const
Bulk data specialization, order of item in operations_ vector corresponds to the BulkOps enum.
PatchPointValues< 3 > & patch_point_vals_
Reference to PatchPointValues.
FeQ(PatchPointValues< 3 > &patch_point_vals, unsigned int op_idx, unsigned int n_dofs)
unsigned int n_dofs_
Number of DOFs.
ValueType operator()(FMT_UNUSED unsigned int shape_idx, FMT_UNUSED const BulkPoint &point)
unsigned int op_idx_
Index of operation in patch_point_vals_.operations vector.
FeQ()=delete
Forbidden default constructor.
ValueType operator()(FMT_UNUSED unsigned int shape_idx, FMT_UNUSED const SidePoint &point)
Bulk Side specialization, order of item in operations_ vector corresponds to the SideOps enum.
Abstract class for the description of a general finite element on a reference simplex in dim dimensio...
unsigned int n_dofs_both() const
unsigned int local_idx() const
Return local index of DOF (on low / high-dim) - should be private method.
bool operator==(const JoinShapeAccessor< ValueType > &other) const
Comparison of accessors.
JoinShapeAccessor(PatchPointValues< 3 > *patch_point_vals_bulk, PatchPointValues< 3 > *patch_point_vals_side, unsigned int n_dofs_bulk, unsigned int n_dofs_side, unsigned int op_idx_bulk, unsigned int op_idx_side, unsigned int join_idx)
PatchPointValues< 3 > * patch_point_vals_bulk_
Pointer to bulk PatchPointValues.
unsigned int op_idx_side_
Index of operation in patch_point_vals_side_.operations vector.
unsigned int op_idx_bulk_
Index of operation in patch_point_vals_bulk_.operations vector.
unsigned int n_dofs_high() const
JoinShapeAccessor()
Default constructor.
void inc()
Iterates to next item.
unsigned int join_idx_
Index of processed DOF.
unsigned int n_dofs_high_
Number of DOFs on high-dim element.
unsigned int join_idx() const
Return global index of DOF.
unsigned int n_dofs_low() const
ValueType operator()(const BulkPoint &point)
unsigned int n_dofs_low_
Number of DOFs on low-dim element.
PatchPointValues< 3 > * patch_point_vals_side_
Pointer to side PatchPointValues.
JoinValues(FMT_UNUSED PatchPointValues< 3 > *patch_point_vals_bulk, FMT_UNUSED PatchPointValues< 3 > *patch_point_vals_side, FMT_UNUSED MixedPtr< FiniteElement > fe)
Constructor.
Range< JoinShapeAccessor< Scalar > > scalar_join_shape(FMT_UNUSED uint component_idx=0)
std::shared_ptr< FiniteElement< dim > > fe_high_dim_
JoinValues(PatchPointValues< 3 > *patch_point_vals_bulk, PatchPointValues< 3 > *patch_point_vals_side, MixedPtr< FiniteElement > fe)
Constructor.
PatchPointValues< 3 > * patch_point_vals_bulk_
Range< JoinShapeAccessor< Scalar > > scalar_join_shape(uint component_idx=0)
std::shared_ptr< FiniteElement< dim-1 > > fe_low_dim_
PatchPointValues< 3 > * patch_point_vals_side_
static ElementMap element_map(ElementAccessor< 3 > elm)
uint register_element(DHCellAccessor cell, uint element_patch_idx)
Register element to patch_point_vals_ table by dimension of element.
PatchArena * patch_arena_
uint register_bulk_point(DHCellAccessor cell, uint elem_table_row, uint value_patch_idx, uint i_point_on_elem)
Register bulk point to patch_point_vals_ table by dimension of element.
~PatchFEValues()
Destructor.
std::array< FeBulk::PatchPointValues< spacedim >, 3 > patch_point_vals_bulk_
Sub objects of bulk data of dimensions 1,2,3.
uint register_side(DHCellSide cell_side)
Register side to patch_point_vals_ table by dimension of side.
void init_finalize()
Finalize initialization, creates child (patch) arena and passes it to PatchPointValue objects.
void print_data_tables(ostream &stream, bool points, bool ints, bool only_bulk=true) const
Temporary development method.
JoinValues< dim > join_values()
Return JoinValue object of dimension given by template parameter.
Quadrature * get_quadrature(uint dim, bool is_bulk) const
Return bulk or side quadrature of given dimension.
BulkValues< dim > bulk_values()
Return BulkValue object of dimension given by template parameter.
uint register_side_point(DHCellSide cell_side, uint elem_table_row, uint value_patch_idx, uint i_point_on_side)
Register side point to patch_point_vals_ table by dimension of side.
void initialize(Quadrature &_quadrature)
Initialize structures and calculates cell-independent data.
void print_operations(ostream &stream) const
Temporary development method.
std::array< FeSide::PatchPointValues< spacedim >, 3 > patch_point_vals_side_
Sub objects of side data of dimensions 1,2,3.
MixedPtr< FiniteElement > fe_
Mixed of shared pointers of FiniteElement object.
SideValues< dim > side_values()
Return SideValue object of dimension given by template parameter.
void resize_tables(TableSizes table_sizes)
Resize tables of patch_point_vals_.
PatchFEValues(unsigned int quad_order, MixedPtr< FiniteElement > fe)
void reinit_patch()
Reinit data.
unsigned int n_dofs() const
Returns the number of shape functions.
void reset()
Reset PatchpointValues structures.
ElOp< spacedim > & make_fe_op(std::initializer_list< uint > shape, ReinitFunction reinit_f, std::vector< uint > input_ops_vec, uint n_dofs, OpSizeType size_type=pointOp)
std::vector< ElOp< spacedim > > operations_
Vector of all defined operations.
Quadrature * get_quadrature() const
Getter for quadrature.
uint dim() const
Getter for dim_.
Scalar scalar_value(uint op_idx, uint point_idx, uint i_dof=0) const
Base class for quadrature rules on simplices in arbitrary dimensions.
Quadrature make_from_side(unsigned int sid) const
unsigned int size() const
Returns number of quadrature points.
Armor::ArmaVec< double, point_dim > point(unsigned int i) const
Returns the ith quadrature point.
General point a+ side_begin_ + ccessor allow iterate over quadrature points of given side defined in ...
unsigned int eval_point_idx() const
Return index in EvalPoints object.
SideValues(PatchPointValues< 3 > &patch_point_vals, MixedPtr< FiniteElement > fe)
Constructor.
ElQ< Vector > normal_vector()
Register the normal vector to a side at side quadrature points.
std::shared_ptr< FiniteElement< dim > > fe_
ElQ< Scalar > JxW()
Same as BulkValues::JxW but register at side quadrature points.
ElQ< Vector > coords()
Create side accessor of coords entity.
FeQ< Scalar > scalar_shape(uint component_idx=0)
Same as BulkValues::scalar_shape but register at side quadrature points.
FeQ< Vector > grad_scalar_shape(uint component_idx=0)
Same as BulkValues::grad_scalar_shape but register at side quadrature points.
std::vector< std::vector< std::vector< arma::mat > > > ref_shape_gradients(std::shared_ptr< FiniteElement< dim >> fe)
Precomputed gradients of basis functions at the quadrature points.
PatchPointValues< 3 > & patch_point_vals_
ElQ< Scalar > determinant()
Create bulk accessor of jac determinant entity.
NodeAccessor< 3 > node(unsigned int i) const
Returns node for given local index i on the side.
Class ElementValues calculates data related to transformation of reference cell to actual cell (Jacob...
Class FESystem for compound finite elements.
Class FEValues calculates finite element data on the actual cells such as shape function values,...
Iter< Object > make_iter(Object obj)
Class MappingP1 implements the affine transformation of the unit cell onto the actual cell.
ArmaMat< double, N, M > mat
@ opCoords
operations evaluated on quadrature points
@ opInvJac
inverse Jacobian
@ opJxW
JxW value of quadrature point.
@ opNormalVec
normal vector of quadrature point
Store finite element data on the actual patch such as shape function values, gradients,...
Definitions of particular quadrature rules on simplices.
Class RefElement defines numbering of vertices, sides, calculation of normal vectors etc.
Struct for pre-computing number of elements, sides, bulk points and side points on each dimension.
std::vector< std::vector< uint > > point_sizes_
void reset()
Set all values to zero.
void copy(const TableSizes &other)
Copy values of other TableSizes instance.
std::vector< std::vector< uint > > elem_sizes_
static void ptop_scalar_shape(std::vector< ElOp< 3 >> &operations, std::vector< std::vector< double > > shape_values, uint scalar_shape_op_idx)
static void ptop_scalar_shape(std::vector< ElOp< 3 >> &operations, IntTableArena &el_table, std::vector< std::vector< std::vector< double > > > shape_values, uint scalar_shape_op_idx)
Enum type UpdateFlags indicates which quantities are to be recomputed on each finite element cell.