Sorption model in mobile zone in case dual porosity is considered. More...
#include <sorption.hh>
Inheritance diagram for SorptionMob:
Collaboration diagram for SorptionMob:
Public Types | |
| typedef ReactionTerm | FactoryBaseType |
 Public Types inherited from ReactionTerm | |
| typedef std::vector< std::shared_ptr< FieldFE< 3, FieldValue< 3 >::Scalar > > > | FieldFEScalarVec |
Public Member Functions | |
| SorptionMob (Mesh &init_mesh, Input::Record in_rec) | |
| Constructor. More... | |
| ~SorptionMob (void) | |
| Destructor. More... | |
| Public Member Functions inherited from SorptionDual | |
| SorptionDual (Mesh &init_mesh, Input::Record in_rec, const string &output_conc_name, const string &output_conc_desc) | |
| Constructor. More... | |
| ~SorptionDual (void) | |
| Destructor. More... | |
| void | set_porosity_immobile (Field< 3, FieldValue< 3 >::Scalar > &por_imm) |
| Sets the immobile porosity field. More... | |
| Public Member Functions inherited from SorptionBase | |
| TYPEDEF_ERR_INFO (EI_ArrayName, std::string) | |
| DECLARE_INPUT_EXCEPTION (ExcSubstanceCountMatch,<< "The size of the input array "<< EI_ArrayName::qval<< " does not match the number of substances.") | |
| SorptionBase (Mesh &init_mesh, Input::Record in_rec) | |
| virtual | ~SorptionBase (void) |
| void | initialize () override |
| Prepares the object to usage. More... | |
| void | zero_time_step () override |
| void | update_solution (void) override |
| Updates the solution. More... | |
| void | output_data (void) override |
| Output method. More... | |
| bool | evaluate_time_constraint (FMT_UNUSED double &time_constraint) override |
| Public Member Functions inherited from ReactionTerm | |
| TYPEDEF_ERR_INFO (EI_Substance, std::string) | |
| TYPEDEF_ERR_INFO (EI_Model, std::string) | |
| DECLARE_INPUT_EXCEPTION (ExcUnknownSubstance,<< "Unknown substance name: "<< EI_Substance::qval) | |
| DECLARE_INPUT_EXCEPTION (ExcWrongDescendantModel,<< "Impossible descendant model: "<< EI_Model::qval) | |
| ReactionTerm (Mesh &init_mesh, Input::Record in_rec) | |
| Constructor. More... | |
| ~ReactionTerm (void) | |
| Destructor. More... | |
| void | choose_next_time (void) override |
| Disable changes in TimeGovernor by empty method. More... | |
| ReactionTerm & | substances (SubstanceList &substances) |
| Sets the names of substances considered in transport. More... | |
| ReactionTerm & | output_stream (std::shared_ptr< OutputTime > ostream) |
| Sets the output stream which is given from transport class. More... | |
| virtual bool | evaluate_time_constraint (double &time_constraint)=0 |
| Computes a constraint for time step. More... | |
| ReactionTerm & | concentration_fields (FieldFEScalarVec &conc_mobile) |
| Public Member Functions inherited from EquationBase | |
| EquationBase () | |
| EquationBase (Mesh &mesh, const Input::Record in_rec) | |
| virtual | ~EquationBase () |
| virtual void | set_time_upper_constraint (double dt, std::string message) |
| virtual void | set_time_lower_constraint (double dt, std::string message) |
| TimeGovernor & | time () |
| virtual void | set_time_governor (TimeGovernor &time) |
| double | planned_time () |
| double | solved_time () |
| Mesh & | mesh () |
| std::shared_ptr< Balance > | balance () const |
| TimeMark::Type | mark_type () |
| FieldSet & | data () |
Static Public Member Functions | |
| static const Input::Type::Record & | get_input_type () |
| Static Public Member Functions inherited from SorptionBase | |
| static const Input::Type::Record & | get_input_type () |
| static Input::Type::Instance | make_output_type (const string &equation_name, const string &output_field_name, const string &output_field_desc) |
| Static Public Member Functions inherited from ReactionTerm | |
| static Input::Type::Abstract & | it_abstract_term () |
| static Input::Type::Abstract & | it_abstract_mobile_term () |
| static Input::Type::Abstract & | it_abstract_immobile_term () |
| static Input::Type::Abstract & | it_abstract_reaction () |
| Static Public Member Functions inherited from EquationBase | |
| static Input::Type::Record & | record_template () |
| Template Record with common keys for derived equations. More... | |
Protected Member Functions | |
| void | compute_common_ele_data (const ElementAccessor< 3 > &elem) override |
Computes CommonElementData. More... | |
| Protected Member Functions inherited from SorptionBase | |
| SorptionBase () | |
| void | make_reactions () |
| void | initialize_substance_ids () |
| Reads names of substances from input and creates indexing to global vector of substance. More... | |
| void | initialize_from_input () |
| Initializes private members of sorption from the input record. More... | |
| void | initialize_fields () |
| Initializes field sets. More... | |
| void | set_initial_condition () |
| Reads and sets initial condition for concentration in solid. More... | |
| void | compute_reaction (const DHCellAccessor &dh_cell) override |
| Compute reaction on a single element. More... | |
| void | isotherm_reinit (unsigned int i_subst, const ElementAccessor< 3 > &elm) |
| Reinitializes the isotherm. More... | |
| void | isotherm_reinit_all (const ElementAccessor< 3 > &elm) |
Calls isotherm_reinit for all isotherms. More... | |
| void | make_tables (void) |
| void | update_max_conc () |
| Computes maximal aqueous concentration at the current step. More... | |
| void | clear_max_conc () |
| Sets max conc to zeros on all regins. More... | |
Static Private Attributes | |
| static const int | registrar |
| Registrar of class to factory. More... | |
Additional Inherited Members | |
| Protected Attributes inherited from SorptionDual | |
| Field< 3, FieldValue< 3 >::Scalar > | immob_porosity_ |
| Protected Attributes inherited from SorptionBase | |
| EqData * | data_ |
| Pointer to equation data. The object is constructed in descendants. More... | |
| unsigned int | n_interpolation_steps_ |
| double | solvent_density_ |
| std::vector< double > | solubility_vec_ |
| std::vector< double > | table_limit_ |
| std::vector< std::vector< double > > | max_conc |
| std::vector< std::vector< Isotherm > > | isotherms |
| unsigned int | n_substances_ |
| std::vector< unsigned int > | substance_global_idx_ |
| Mapping from local indexing of substances to global. More... | |
| std::shared_ptr< ReactionTerm > | reaction_liquid |
| std::shared_ptr< ReactionTerm > | reaction_solid |
| struct SorptionBase::CommonElementData | common_ele_data |
| Protected Attributes inherited from ReactionTerm | |
| FieldFEScalarVec | conc_mobile_fe |
| FieldFEs representing P0 interpolation of mobile concentration (passed from transport). More... | |
| SubstanceList | substances_ |
| Names belonging to substances. More... | |
| std::shared_ptr< OutputTime > | output_stream_ |
| Pointer to a transport output stream. More... | |
| std::shared_ptr< DOFHandlerMultiDim > | dof_handler_ |
| Pointer to DOF handler used through the reaction tree. More... | |
| Protected Attributes inherited from EquationBase | |
| bool | equation_empty_ |
| flag is true if only default constructor was called More... | |
| Mesh * | mesh_ |
| TimeGovernor * | time_ |
| Input::Record | input_record_ |
| FieldSet * | eq_data_ |
| std::shared_ptr< Balance > | balance_ |
| object for calculation and writing the mass balance to file. More... | |
Detailed Description
Sorption model in mobile zone in case dual porosity is considered.
Definition at line 106 of file sorption.hh.
Member Typedef Documentation
Definition at line 109 of file sorption.hh.
Constructor & Destructor Documentation
| SorptionMob::SorptionMob | ( | Mesh & | init_mesh, |
| Input::Record | in_rec | ||
| ) |
Constructor.
Definition at line 113 of file sorption.cc.
| SorptionMob::~SorptionMob | ( | void | ) |
Destructor.
Definition at line 118 of file sorption.cc.
Member Function Documentation
|
overrideprotectedvirtual |
|
static |
Definition at line 96 of file sorption.cc.
Member Data Documentation
|
staticprivate |
Initial value:
=
Input::register_class< SorptionMob, Mesh &, Input::Record >("SorptionMobile") +
Registrar of class to factory.
Definition at line 125 of file sorption.hh.
The documentation for this class was generated from the following files:
- /opt/flow123d/flow123d/src/reaction/sorption.hh
- /opt/flow123d/flow123d/src/reaction/sorption.cc
