#include <linsys_BDDC.hh>

Inheritance diagram for LinSys_BDDC:

Collaboration diagram for LinSys_BDDC:

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Public Types
typedef LinSys	FactoryBaseType

Public Types inherited from LinSys
enum	SetValuesMode { INSERT =INSERT_VALUES, ADD =ADD_VALUES, ALLOCATE, DONE, NONE }

Public Member Functions
	LinSys_BDDC (const unsigned numDofsSub, const Distribution *rows_ds, const int matrixTypeInt=0, const int numSubLoc=1, const bool swap_sign=false)

void	set_tolerances (double r_tol, double a_tol, unsigned int max_it) override

void	load_mesh (const int nDim, const int numNodes, const int numDofs, const std::vector< int > &inet, const std::vector< int > &nnet, const std::vector< int > &nndf, const std::vector< int > &isegn, const std::vector< int > &isngn, const std::vector< int > &isvgvn, const std::vector< double > &xyz, const std::vector< double > &element_permeability, const int meshDim)

void	mat_set_values (int nrow, int rows, int ncol, int cols, double *vals) override

void	rhs_set_values (int nrow, int rows, double vals) override

void	diagonal_weights_set_value (int global_index, double value)

PetscErrorCode	mat_zero_entries () override

PetscErrorCode	rhs_zero_entries () override

void	finish_assembly () override

void	apply_constrains (double scalar=1.) override

LinSys::SolveInfo	solve () override

void	set_from_input (const Input::Record in_rec) override

double	get_solution_precision () override

double	compute_residual () override

void	print_matrix (std::ostream &out)

	~LinSys_BDDC ()

Public Member Functions inherited from LinSys
	LinSys (const Distribution *rows_ds)

	LinSys (LinSys &other)

unsigned int	size ()

unsigned int	vec_lsize ()

virtual const Mat *	get_matrix ()

virtual const Vec *	get_rhs ()

void	set_matrix_changed ()

void	set_rhs_changed ()

bool	is_matrix_changed ()

bool	is_rhs_changed ()

virtual PetscErrorCode	set_matrix (Mat &matrix, MatStructure str)

virtual PetscErrorCode	set_rhs (Vec &rhs)

const Vec &	get_solution ()

void	set_solution (Vec sol_vec)

void	set_solution (double *sol_array)

void	set_solution ()

double *	get_solution_array ()

virtual void	start_allocation ()

virtual void	start_add_assembly ()

virtual void	start_insert_assembly ()

void	mat_set_value (int row, int col, double val)

void	rhs_set_value (int row, double val)

void	set_values (int nrow, int rows, int ncol, int cols, PetscScalar mat_vals, PetscScalar rhs_vals)
	Set values in the system matrix and values in the right-hand side vector on corresponding rows. More...

void	set_local_system (LocalSystem &local)

void	set_values (std::vector< int > &row_dofs, std::vector< int > &col_dofs, const arma::mat &matrix, const arma::vec &rhs, const arma::vec &row_solution, const arma::vec &col_solution)

void	add_constraint (int row, double value)

double	get_residual_norm ()

double	get_relative_accuracy ()

virtual double	get_absolute_accuracy ()

void	set_symmetric (bool flag=true)

bool	is_symmetric ()

void	set_positive_definite (bool flag=true)

void	set_negative_definite (bool flag=true)

bool	is_positive_definite ()

bool	is_negative_definite ()

bool	is_new ()

bool	is_preallocated ()

void	set_spd_via_symmetric_general (bool flag=true)

bool	is_spd_via_symmetric_general ()

virtual void	view ()

virtual	~LinSys ()

Static Public Member Functions
static const Input::Type::Record &	get_input_type ()

Static Public Member Functions inherited from LinSys
static Input::Type::Abstract &	get_input_type ()

Private Types
typedef la::BddcmlWrapper	Bddcml_

Private Attributes
int	max_nondecr_it_
	parameters expected from input file: More...

int	number_of_levels_
	number of levels in the multilevel method More...

bool	use_adaptive_bddc_
	should adaptive BDDC be used? More...

int	bddcml_verbosity_level_

const bool	swap_sign_
	swap sign of matrix and rhs entries, e.g. to make the matrix SPD More...

std::vector< int >	isngn_
	indices of subdomain nodes in global numbering More...

std::vector< double >	locSolution_
	subdomain solution More...

Vec	locSolVec_
	local solution PETSc vector - sequential More...

VecScatter	VSpetscToSubScatter_
	scatter from solution_ to locSolVec_ More...

Bddcml_ *	bddcml_
	BDDCML wrapper. More...

Static Private Attributes
static const int	registrar = LinSys_BDDC::get_input_type().size()
	Registrar of class to factory. More...

Additional Inherited Members
Protected Types inherited from LinSys
typedef std::pair< unsigned, double >	Constraint_

typedef std::vector< Constraint_ >	ConstraintVec_

Protected Attributes inherited from LinSys
double	r_tol_
	relative tolerance of linear solver More...

double	a_tol_
	absolute tolerance of linear solver More...

unsigned int	max_it_
	maximum number of iterations of linear solver More...

MPI_Comm	comm_

SetValuesMode	status_
	Set value status of the linear system. More...

const unsigned	lsize_
	local number of matrix rows (non-overlapping division of rows) More...

unsigned	size_
	global number of matrix rows, i.e. problem size More...

const Distribution *	rows_ds_
	final distribution of rows of MH matrix More...

bool	symmetric_

bool	positive_definite_

bool	negative_definite_

bool	spd_via_symmetric_general_

bool	matrix_changed_
	true if the matrix was changed since the last solve More...

bool	rhs_changed_
	true if the right hand side was changed since the last solve More...

Vec	solution_
	PETSc vector constructed with vb array. More...

double *	v_solution_
	local solution array pointing into Vec solution_ More...

bool	own_vec_
	Indicates if the solution vector has been allocated by this class. More...

bool	own_solution_
	Indicates if the solution array has been allocated by this class. More...

double	residual_norm_
	local solution array pointing into Vec solution_ More...

ConstraintVec_	constraints_

std::vector< double >	globalSolution_
	global solution in numbering for linear system More...

Input::Record	in_rec_

Static Protected Attributes inherited from LinSys
static constexpr double	default_r_tol_ = 1e-7

static constexpr double	default_a_tol_ = 1e-11

static constexpr unsigned int	default_max_it_ = 1000

Detailed Description

Definition at line 41 of file linsys_BDDC.hh.

Member Typedef Documentation

typedef la::BddcmlWrapper LinSys_BDDC::Bddcml_

private

Definition at line 126 of file linsys_BDDC.hh.

typedef LinSys LinSys_BDDC::FactoryBaseType

Definition at line 45 of file linsys_BDDC.hh.

Constructor & Destructor Documentation

LinSys_BDDC::LinSys_BDDC	(	const unsigned	numDofsSub,
		const Distribution *	rows_ds,
		const int	matrixTypeInt = `0`,
		const int	numSubLoc = `1`,
		const bool	swap_sign = `false`
	)

Definition at line 63 of file linsys_BDDC.cc.

LinSys_BDDC::~LinSys_BDDC ( )

Definition at line 313 of file linsys_BDDC.cc.

Member Function Documentation

void LinSys_BDDC::apply_constrains ( double scalar = 1. )

overridevirtual

Apply constrains to assembled matrix. Constrains are given by pairs: global row index, value. i.e. typedef pair<unsigned int, double> Constrain;

What is th meaning of ( const double factor ) form Cambridge code?

Implements LinSys.

Definition at line 254 of file linsys_BDDC.cc.

double LinSys_BDDC::compute_residual ( )

inlineoverridevirtual

Explicitly compute residual and its norm for current solution.

Implements LinSys.

Definition at line 88 of file linsys_BDDC.hh.

void LinSys_BDDC::diagonal_weights_set_value	(	int	global_index,
		double	value
	)

Definition at line 224 of file linsys_BDDC.cc.

void LinSys_BDDC::finish_assembly ( )

overridevirtual

Finish assembly of the whole system. For PETSC this should call MatEndAssembly with MAT_FINAL_ASSEMBLY

Implements LinSys.

Definition at line 247 of file linsys_BDDC.cc.

const it::Record & LinSys_BDDC::get_input_type ( )

static

Definition at line 37 of file linsys_BDDC.cc.

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double LinSys_BDDC::get_solution_precision ( )

overridevirtual

Get precision of solving

Implements LinSys.

Definition at line 381 of file linsys_BDDC.cc.

void LinSys_BDDC::load_mesh	(	const int	nDim,
		const int	numNodes,
		const int	numDofs,
		const std::vector< int > &	inet,
		const std::vector< int > &	nnet,
		const std::vector< int > &	nndf,
		const std::vector< int > &	isegn,
		const std::vector< int > &	isngn,
		const std::vector< int > &	isvgvn,
		const std::vector< double > &	xyz,
		const std::vector< double > &	element_permeability,
		const int	meshDim
	)

Definition at line 127 of file linsys_BDDC.cc.

void LinSys_BDDC::mat_set_values	(	int	nrow,
		int *	rows,
		int	ncol,
		int *	cols,
		double *	vals
	)

overridevirtual

Assembly full rectangular submatrix into the system matrix. Should be virtual, implemented differently in particular solvers.

Implements LinSys.

Definition at line 178 of file linsys_BDDC.cc.

PetscErrorCode LinSys_BDDC::mat_zero_entries ( )

overridevirtual

Clears entries of the matrix

Reimplemented from LinSys.

Definition at line 231 of file linsys_BDDC.cc.

void LinSys_BDDC::print_matrix ( std::ostream & out )

Prints matrix in coordinate format, can be load by matlab as a sparse matrix. Works only on 1 proc.

Definition at line 390 of file linsys_BDDC.cc.

void LinSys_BDDC::rhs_set_values	(	int	nrow,
		int *	rows,
		double *	vals
	)

overridevirtual

Set values of the system right-hand side. Should be virtual, implemented differently in particular solvers.

Implements LinSys.

Definition at line 203 of file linsys_BDDC.cc.

PetscErrorCode LinSys_BDDC::rhs_zero_entries ( )

overridevirtual

Clears entries of the right-hand side

Reimplemented from LinSys.

Definition at line 239 of file linsys_BDDC.cc.

void LinSys_BDDC::set_from_input ( const Input::Record in_rec )

overridevirtual

Sets basic parameters of LinSys defined by user in input file and used to calculate

Reimplemented from LinSys.

Definition at line 302 of file linsys_BDDC.cc.

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void LinSys_BDDC::set_tolerances	(	double	r_tol,
		double	a_tol,
		unsigned int	max_it
	)

overridevirtual

Set relative tolerance, absolute tolerance, and maximum number of iterations of the linear solver.

For each of these three parameters we first look for the value at user input if not set we use the value provided to this method and finally the default values are set by the call of this method in the constructor.

Implements LinSys.

Definition at line 115 of file linsys_BDDC.cc.

LinSys::SolveInfo LinSys_BDDC::solve ( )

overridevirtual

Solve the system and return convergence reason.

Implements LinSys.

Definition at line 261 of file linsys_BDDC.cc.

Member Data Documentation

Bddcml_* LinSys_BDDC::bddcml_

private

BDDCML wrapper.

Definition at line 127 of file linsys_BDDC.hh.

int LinSys_BDDC::bddcml_verbosity_level_

private

level of verbosity of BDDCML library ( 0 - only fatal errors reported, 1 - mild output, 2 - detailed output )//!< should adaptive BDDC be used?

Definition at line 114 of file linsys_BDDC.hh.

std::vector<int> LinSys_BDDC::isngn_

private

indices of subdomain nodes in global numbering

Definition at line 121 of file linsys_BDDC.hh.

std::vector<double> LinSys_BDDC::locSolution_

private

subdomain solution

Definition at line 122 of file linsys_BDDC.hh.

Vec LinSys_BDDC::locSolVec_

private

local solution PETSc vector - sequential

Definition at line 123 of file linsys_BDDC.hh.

int LinSys_BDDC::max_nondecr_it_

private

parameters expected from input file:

maximum number of iterations of linear solver with non-decreasing residual

Definition at line 111 of file linsys_BDDC.hh.

int LinSys_BDDC::number_of_levels_

private

number of levels in the multilevel method

Definition at line 112 of file linsys_BDDC.hh.

const int LinSys_BDDC::registrar = LinSys_BDDC::get_input_type().size()

staticprivate

Registrar of class to factory.

Definition at line 108 of file linsys_BDDC.hh.

const bool LinSys_BDDC::swap_sign_

private

swap sign of matrix and rhs entries, e.g. to make the matrix SPD

Definition at line 119 of file linsys_BDDC.hh.

bool LinSys_BDDC::use_adaptive_bddc_

private

should adaptive BDDC be used?

Definition at line 113 of file linsys_BDDC.hh.

VecScatter LinSys_BDDC::VSpetscToSubScatter_

private

scatter from solution_ to locSolVec_

Definition at line 124 of file linsys_BDDC.hh.

The documentation for this class was generated from the following files:

/opt/flow123d/flow123d/src/la/linsys_BDDC.hh
/opt/flow123d/flow123d/src/la/linsys_BDDC.cc

Public Types

Public Member Functions

Static Public Member Functions

Private Types

Private Attributes

Static Private Attributes

Additional Inherited Members

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation