[DBG] base_image = flow123d/flow-dev-gnu-dbg:4.0.1 [DBG] image_tag = 4.0.1 [DBG] image_kind = dbg [DBG] image_env = gnu [DBG] action = run [DBG] mount dirs - /home/jb/workspace [DBG] - /home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003 [DBG] user = flow(1000:1000) [DBG] theme = light [DBG] autopull = 1 [DBG] privileged = 0 [DBG] Executing flow123d with args /home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003/transport_fullscale.yaml [RUN] docker run --rm -euid=1000 -egid=1000 -etheme=light -ewho=flow -ehome=/mnt//home/jb -v //home/jb:/mnt//home/jb -w //home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003 -v //home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003://home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003 -v //home/jb/workspace://home/jb/workspace flow123d/flow-dev-gnu-dbg:4.0.1 ../../../../../flow123d/bin/flow123d /home/jb/workspace/Endorse/tests/sandbox/output/L00_S0000003/transport_fullscale.yaml 00:00:01.725 MESSAGE.MPI size: 1 00:00:01.733 MESSAGE.This is Flow123d, version 4.0.0a commit: fb38da341 00:00:01.733 MESSAGE.Branch: JB_transport Build: Dec 2 2022, 15:32:31 flags: -fPIC -std=c++14 -pedantic -Wall -Wextra -Werror -Wno-catch-value -Wno-deprecated-copy -Wno-misleading-indentation -Wno-implicit-fallthrough -Wno-vla -Wno-unused-local-typedefs -Wno-deprecated-declarations Fetch URL: git@github.com:flow123d/flow123d.git 00:00:02.029 MESSAGE.- Reading nodes... 00:00:02.089 MESSAGE.... 14137 nodes read. 00:00:02.089 MESSAGE.- Reading elements... 00:00:02.334 MESSAGE.... 63050 bulk elements, 15899 boundary elements. 00:00:02.544 MESSAGE.Created 134902 edges and 3052 neighbours. 00:00:02.766 MESSAGE.Created 24113 edges and 226 neighbours on boundary mesh. 00:00:02.783 MESSAGE.----------- Table of all regions: ----------- - Boundary elementary regions - name id dim .IMPLICIT_BOUNDARY4294967293 10 .box_boreholes 14 2 .box_outer 12 2 .box_tunnel 16 2 .fr_bore 15 1 .fr_outer 13 1 - Bulk elementary regions - name id dim box 1 3 fractures 17 2 - Sets of regions - name contains regions .BOUNDARY [".fr_outer", ".fr_bore", ".box_outer", ".box_boreholes", ".box_tunnel", ".IMPLICIT_BOUNDARY"] ALL [".fr_outer", ".fr_bore", ".box_outer", ".box_boreholes", ".box_tunnel", "fractures", "box", ".IMPLICIT_BOUNDARY"] BULK ["fractures", "box"] --------------------------------------------- 00:00:03.718 MESSAGE.- Reading nodes... 00:00:03.777 MESSAGE.... 14137 nodes read. 00:00:03.777 MESSAGE.- Reading elements... 00:00:04.019 MESSAGE.... 63050 bulk elements, 15899 boundary elements. 00:00:10.987 MESSAGE.- Reading nodes... 00:00:12.495 MESSAGE.... 371547 nodes read. 00:00:12.495 MESSAGE.- Reading elements... 00:00:19.999 MESSAGE.... 2130457 bulk elements, 0 boundary elements. 00:00:31.204 MESSAGE.Flow zero time step - steady case 00:00:32.759 MESSAGE.[nonlinear solver] norm of initial residual: 0.0250871 0 KSP Residual norm 7.030412805734e+04 1 KSP Residual norm 1.514058000454e+04 2 KSP Residual norm 6.126896039699e+03 3 KSP Residual norm 4.303281631410e+03 4 KSP Residual norm 3.120927850796e+03 5 KSP Residual norm 2.371898614907e+03 6 KSP Residual norm 1.995399205631e+03 7 KSP Residual norm 1.767503299749e+03 8 KSP Residual norm 1.569677840316e+03 9 KSP Residual norm 1.328817471042e+03 10 KSP Residual norm 1.006717681902e+03 11 KSP Residual norm 9.751569164883e+02 12 KSP Residual norm 1.009532536257e+03 13 KSP Residual norm 8.822506012912e+02 14 KSP Residual norm 7.481208244174e+02 15 KSP Residual norm 8.106982969684e+02 16 KSP Residual norm 7.660681427037e+02 17 KSP Residual norm 6.385318523356e+02 18 KSP Residual norm 7.010246226157e+02 19 KSP Residual norm 6.716714907709e+02 20 KSP Residual norm 5.396218428154e+02 21 KSP Residual norm 5.615131396280e+02 22 KSP Residual norm 5.220396579877e+02 23 KSP Residual norm 3.947377683909e+02 24 KSP Residual norm 3.666044685368e+02 25 KSP Residual norm 3.196122794302e+02 26 KSP Residual norm 2.299245078029e+02 27 KSP Residual norm 2.157809713684e+02 28 KSP Residual norm 2.055566891092e+02 29 KSP Residual norm 1.797362613830e+02 30 KSP Residual norm 1.970022690857e+02 31 KSP Residual norm 1.799143897428e+02 32 KSP Residual norm 1.437668950298e+02 33 KSP Residual norm 1.384786969128e+02 34 KSP Residual norm 1.205315439532e+02 35 KSP Residual norm 1.005424253224e+02 36 KSP Residual norm 9.039759828705e+01 37 KSP Residual norm 7.277435073951e+01 38 KSP Residual norm 5.654473915285e+01 39 KSP Residual norm 5.578892259836e+01 40 KSP Residual norm 5.502265028789e+01 41 KSP Residual norm 5.908444040719e+01 42 KSP Residual norm 6.647676996741e+01 43 KSP Residual norm 6.168537930641e+01 44 KSP Residual norm 5.450167577763e+01 45 KSP Residual norm 4.651089352911e+01 46 KSP Residual norm 3.378778118937e+01 47 KSP Residual norm 2.454159626943e+01 48 KSP Residual norm 1.895498736828e+01 49 KSP Residual norm 1.325178365795e+01 50 KSP Residual norm 9.157595298162e+00 51 KSP Residual norm 6.181475126345e+00 52 KSP Residual norm 4.599010994593e+00 53 KSP Residual norm 3.886311120585e+00 54 KSP Residual norm 3.364885016476e+00 55 KSP Residual norm 2.983321436245e+00 56 KSP Residual norm 2.161891061241e+00 57 KSP Residual norm 1.566272089691e+00 58 KSP Residual norm 1.139963677796e+00 59 KSP Residual norm 6.648525799524e-01 60 KSP Residual norm 4.526666837081e-01 61 KSP Residual norm 2.829320212817e-01 62 KSP Residual norm 1.334142891494e-01 63 KSP Residual norm 8.467127998588e-02 64 KSP Residual norm 4.863609841552e-02 65 KSP Residual norm 2.308014561996e-02 66 KSP Residual norm 1.253588218255e-02 67 KSP Residual norm 6.704243334766e-03 68 KSP Residual norm 2.933895419748e-03 69 KSP Residual norm 1.547440691865e-03 70 KSP Residual norm 7.897384474179e-04 71 KSP Residual norm 3.916880411312e-04 00:00:35.527 MESSAGE.[schur solver] lin. it: 71, reason: 2, residual: 6.18703e-10 00:00:35.531 MESSAGE.[nonlinear solver] lin. it: 71, reason: 2, residual: 6.18703e-10 0 KSP Residual norm 0.000000000000e+00 00:00:42.730 MESSAGE.TG[TOS]:000001 t:725395981642.2213 dt:725395981642.221313 dt_int< 0.000000,725395981642.221313> 00:00:42.730 MESSAGE.TG[Convection]:000000 t: 0.0000 dt: 1.000000 dt_int< 0.000000,725395981642.221313> 00:00:42.730 MESSAGE.TG[TDG]:000001 t:725395981642.2213 dt:725395981642.221313 dt_int< 0.000000,725395981642.221313> 0 KSP Residual norm 8.559798595143e-08 1 KSP Residual norm 3.057400590911e-08 2 KSP Residual norm 2.363522232323e-08 3 KSP Residual norm 1.882180287276e-08 4 KSP Residual norm 1.614746077946e-08 5 KSP Residual norm 1.350522322650e-08 6 KSP Residual norm 1.120705701909e-08 7 KSP Residual norm 9.209389440770e-09 00:00:52.653 MESSAGE.TG[TOS]:000002 t:1450791963284.4424 dt:725395981642.221191 dt_int< 0.000000,725395981642.221313> 00:00:52.653 MESSAGE.TG[Convection]:000001 t:725395981642.2213 dt:725395981642.221313 dt_int< 0.000000,725395981642.221313> 00:00:52.653 MESSAGE.TG[TDG]:000002 t:1450791963284.4424 dt:725395981642.221191 dt_int< 0.000000,725395981642.221313>